| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_4009 |
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| Symbol | |
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| ID | 6474903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 4530619 |
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| End bp | 4531536 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642733222 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_002030391 |
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| Protein GI | 194367781 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.105692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAAGA TCGTGAAGAA GACCCTGCCG GTGCTGCTCA CCAGCGCAGC CGTGATCGTC
GCCCTGCTGG TGCTGCGCCA GCTGTGGGTC TATTACATGG ATGAGCCGTG GACCCGCGAT
GCCCATGTCG GCGCCGACGT GGTGCAGGTG GCGCCGGACG TGTCCGGGCT GGTGGAAACG
GTGCAGGTGG CCGACAACCA GGCGGTGAAG AAGGGTGACC TGCTGTTCGT GGTCGACCGA
GCCCGTTACC GCATCGCGCT GGAGCAGGCC AAGGCCAGCC TGGGCGAGCG CCAGGCCTCG
GTGGCACAGC TGCGCCGCGA GATCGGCCGT GACCGCAGCC TGCAGGACCT GGTCGCCGCC
GAGGACGCCG AAGTGCGCCG CGCCAAGCTG CAGGCCGCAC AGGCTGCACT GGCCACCGCA
CAGGCCGCGG TCGACCTGGC CGAGCTCAAC CTGAGCCGCA CCGAGGTGCG CGCACCGGCC
GATGGCCGGG TCAACGACCG CACCATGCGC GTGGGTGACT ACGTGGTGGC CGGCAAGCCA
GTGCTGGCGC TGCTGGATAC CGGCTCGTTC CGCATCGATG GCTACTTCGA GGAAACCCGA
CTGCGTGGCG TCGCGCCGGG GCAGCGCGTG GACATCCGCC TGATGGGTGA ATCGACCCCG
CTGCGCGGCC ATGTCGAGAG CATCGCCGCC GGCATCGAGG ACCGCTACCG CAGCAATGGC
AGCACCCTGC TGCCGAACGT GACCCCGGCC TTCGACTGGG TGCGCCTGGC CCAGCGCATC
CCGGTGCGCA TCGCCATCGA CGAGGTGCCC AAGGGCGTCG AACTGATCGC CGGCCGCACC
GCCACGGTGA CCGTGGACAC CGGCCGCCAC CCGCACAACG ACAAGGCCGG CACCGCGCCG
ACACAGGCGG GCCTGTGA
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| Protein sequence | MNKIVKKTLP VLLTSAAVIV ALLVLRQLWV YYMDEPWTRD AHVGADVVQV APDVSGLVET
VQVADNQAVK KGDLLFVVDR ARYRIALEQA KASLGERQAS VAQLRREIGR DRSLQDLVAA
EDAEVRRAKL QAAQAALATA QAAVDLAELN LSRTEVRAPA DGRVNDRTMR VGDYVVAGKP
VLALLDTGSF RIDGYFEETR LRGVAPGQRV DIRLMGESTP LRGHVESIAA GIEDRYRSNG
STLLPNVTPA FDWVRLAQRI PVRIAIDEVP KGVELIAGRT ATVTVDTGRH PHNDKAGTAP
TQAGL
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