| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_4000 |
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| Symbol | |
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| ID | 6474894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 4520310 |
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| End bp | 4521590 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642733213 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002030382 |
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| Protein GI | 194367772 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.133602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCTGC ATCCGCTCCG CCAGCCTGCG CATTACCTGT TCGTGCTGCC CGCCATGCTG
GTTGCCGTGG TGCTGTGCAC CGCATTGGAT ACCGCAGACG TGGCCAGCCC GGCGCAGCGC
ATCCTGCCCT GGCTGCTGGC CTGCCTCGGC GCGGGGCTGG CCCTGCTCTA CCACCAGATA
CGTTCGCTCT GCCTGCTGCT GGTGGTGGCG GTCATGTTCG CGCTGCTGCA CCAGGATGTC
GGCGGCTACC TGCGCAGCGG CCATGTCGGC GCGCTGACAC CGCTGCGCTT CCATGCCATC
TCGGCGTGGC TGCCATTGCT GTTCACCGGC CTGTCGTTGT GGCCGGAGCG CGGGCGCCGA
CGCCAGGACC TGCTGCTGCG CGGCGTGGTA TGCAGCGTGG CGCTGCTGAT CTTCCTGCTG
CTGGCCACGC AGCAGCCGCG CGGCATGCAC GATCTGCTGT CGAACCGTCA CTGGGCGTGG
ATCCCGGCCG ACTGGAACGC GCTGGCGCAG CTACCGGCGC TGCTGTTCCT GCTGGCGACC
GCCGCGCTGG GCTGGCAGGC CTGGCGGCAC CCGCGCCCGT TGCACACGGC AATGCTGCTG
GCGCTGCTGT GCCTGTGGTG GATGCTGCCA CGGGTGTTCC TGCAGCCGGT GCTGCTGCCG
GCGCTGAGCT GCGCCGCCCT GCTGCTGGTG CTGGGTGCGA TGCTGCAGGA GTCCTTCCAC
ATGGCCTTCC GCGATGAGCT GACCGGCCTG CCGGGGCGCC GCGCGTTCAA CGAGACCCTG
CAGCGGGCAC GCGGCACCTA CAGCATCGCG ATGGTGGACG TGGACCACTT CAAGTCATTC
AACGATACCC ATGGCCACGA CACCGGCGAT GACGTGCTGC GACTGGTGGC CTCGCGGCTT
GCGAAGGTCG GCGACGGTGG TCGGGCATTC CGCTATGGCG GCGAGGAATT CGCGGTGGTG
TTCCTGGACC GTCCGGCGGC GGCCTGCGTC GATGCGGTCG AAGCCCTGCG GCAGAGTATC
GAGGACACCC GCATGCAGCT GCGCGACCGC AGCACCCGCA GCCGCGACGA CGAGGCCGGT
CGACAGCAAC GCGGACGCGG TGGCAGCGGC CAGGTCGTGC AGGTGACGGT GAGCATCGGC
CTGGCCGACA GTCGTGTGGA CCAGCGGCCG ACGGCGGTGG TCAAGGCCGC CGACCAGGCG
CTGTACGCGG CCAAGGACGG GGGCCGCAAC CAGGTGCATG CGCAGGCCGG CCAGCGCGTG
CTGGCCATGC GTGGCGGCTG A
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| Protein sequence | MPLHPLRQPA HYLFVLPAML VAVVLCTALD TADVASPAQR ILPWLLACLG AGLALLYHQI
RSLCLLLVVA VMFALLHQDV GGYLRSGHVG ALTPLRFHAI SAWLPLLFTG LSLWPERGRR
RQDLLLRGVV CSVALLIFLL LATQQPRGMH DLLSNRHWAW IPADWNALAQ LPALLFLLAT
AALGWQAWRH PRPLHTAMLL ALLCLWWMLP RVFLQPVLLP ALSCAALLLV LGAMLQESFH
MAFRDELTGL PGRRAFNETL QRARGTYSIA MVDVDHFKSF NDTHGHDTGD DVLRLVASRL
AKVGDGGRAF RYGGEEFAVV FLDRPAAACV DAVEALRQSI EDTRMQLRDR STRSRDDEAG
RQQRGRGGSG QVVQVTVSIG LADSRVDQRP TAVVKAADQA LYAAKDGGRN QVHAQAGQRV
LAMRGG
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