| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3984 |
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| Symbol | |
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| ID | 6474868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 4491287 |
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| End bp | 4493122 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642733187 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002030366 |
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| Protein GI | 194367756 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.768816 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATC GGCTGCCGGT GGGCACGCCC GGCGAGGCTG GCGGCGTACC GCTGCCGTGG
GGTCGCCTGC AGTTCGAACA GGTGGGCGCG GCCCTGATCG CTGATGGCCT GGTGGCCGAG
CAGGAGCGCG AACGCATGCG GTTTTCCGCA CAAGGCGCGC GCAATGCCAG TGAAGTGCAC
CCGCTGGTGC TGCTGTCCAA CCTCAAGCTG GCGGCCAGCG GCGGCGGCGA ACTGACCCTG
GAACGCCTCA CCGAGTGGCT GGCGCGGCGC ACCAGCAGCC GCTACCTGCG TATCGATCCG
ACCCGGGTCG ACGTTGCCGC CGTCACCGCA CTGGTCTCGC ATGCCTATGC ACGCCGCCAC
CGCTTCCTGC CGCTGGCGGT GGATGCCGAG CGCGTGCTGG TGGCCACCAG CGAGCCGCTG
GTGCAGGAAT GGCGCCGTGA CCTGCAGCAC CTGACCCGGC GCCGCATCGA ACTGGCGGTG
GTCAACCCGC TGGACCTGCA CCGCTACACC ATGGAGTTCT ACGGGGTGAC CCGTTCGGTG
CGCGGCGCCC GAGGCGACGT GCGTGGCGAA GCCAATACCA CCCTGCCCAG CTTCGAACAG
CTGGTGGAGC TGGGCCGCAC CGGCGACGTC AACGCCGACG ACCAGCACAT CGTGCATATC
GTCGACTGGC TGCTGCAGTA CGCCTACGAG CAGCGCGCGT CGGACATCCA CCTGGAGCCA
CGCCGCGAAA TGGGGCGCAT GCGCTTCCGC ATCGACGGCG TGCTGCACAA GGTGTTCGAG
GTACCGCCGG CGGTGATGAC CGCGGTGGTC AGCCGCATCA AGGTGCTCGG CCGCATGGAC
CTGGCCGAAC GCCGGCGCCC GCAGGATGGC CGCATCAAGA CCCGTTCGCC GGGCGGCCGC
GAGGTCGAGA TGCGCCTGTC GACCATGCCC ACCGCCTTCG GCGAGAAGTG CGTGATGCGC
ATCTTCGACC CCGATGCCGC GTTCAAGAGC ATCGACCAGC TCGGTTTCAG CCCGCAGGAG
GCGGCGGGCT GGAATGCACT GGTCGAACGC CCGCACGGCA TCGTGCTGGT GACCGGCCCG
ACCGGCTCGG GCAAGACCAC CACCCTGTAT TCGACGCTGA AGCGCCTGGC CACGCCGGAC
GTGAACGTGT GCACGGTGGA GGACCCGATC GAGATGATCG CGCCCGAGTT CAACCAGATG
CAGGTGCAGA CCAATATCGA CCTGGACTTC GCCAGCGGCG TGCGCACCCT GCTGCGGCAG
GACCCGGACA TCATCATGAT CGGCGAGATC CGCGACCTGG AAACCGCGCA GATGGCGGTG
CAGGCCTCGC TGACCGGCCA TCTGGTGCTG TCCACCCTGC ATACCAACGA CGCGCCCTCG
GCGGTCACCC GCCTGCTCGA CCTGGGCGTG CCGCACTACC TGCTGGCCAG CACCCTCAAC
GGCATCCTTG CCCAGCGCCT GGTGCGCACG CTGTGCCCGC ACTGCAAGCA ACCGCACAGC
TTCGGCGCGG CCGATTGGGC GGTGCTGGCT GATAGCCATG CTGCATATCC AGATGCCGCC
ACGCCCTGTC GGCCGGTCGG TTGCCTGGAG TGCCGGCGCA CCGGATTCCT CGGCCGCATC
GGCCTGTATG AGTTGCTGCC ATTGGGTTCG CGGCTGCGCG GGCAGATCCG CGCCGACATG
GATCTGGCCG GTTTCACCCG CGCCGCGCGG GCTGAAGGGC TGCGAACCCT GCGTCAGGCC
GGGCTTGAAA AGGTGGCGCA GGGGCTGACT ACAATCGAGG AAGTCCTGTC AGTCCTGCCG
CCCCCGGATG AACCCAGCCC CATTCCTGAT CCTTGA
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| Protein sequence | MEHRLPVGTP GEAGGVPLPW GRLQFEQVGA ALIADGLVAE QERERMRFSA QGARNASEVH
PLVLLSNLKL AASGGGELTL ERLTEWLARR TSSRYLRIDP TRVDVAAVTA LVSHAYARRH
RFLPLAVDAE RVLVATSEPL VQEWRRDLQH LTRRRIELAV VNPLDLHRYT MEFYGVTRSV
RGARGDVRGE ANTTLPSFEQ LVELGRTGDV NADDQHIVHI VDWLLQYAYE QRASDIHLEP
RREMGRMRFR IDGVLHKVFE VPPAVMTAVV SRIKVLGRMD LAERRRPQDG RIKTRSPGGR
EVEMRLSTMP TAFGEKCVMR IFDPDAAFKS IDQLGFSPQE AAGWNALVER PHGIVLVTGP
TGSGKTTTLY STLKRLATPD VNVCTVEDPI EMIAPEFNQM QVQTNIDLDF ASGVRTLLRQ
DPDIIMIGEI RDLETAQMAV QASLTGHLVL STLHTNDAPS AVTRLLDLGV PHYLLASTLN
GILAQRLVRT LCPHCKQPHS FGAADWAVLA DSHAAYPDAA TPCRPVGCLE CRRTGFLGRI
GLYELLPLGS RLRGQIRADM DLAGFTRAAR AEGLRTLRQA GLEKVAQGLT TIEEVLSVLP
PPDEPSPIPD P
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