Gene Smal_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3954 
Symbol 
ID6474838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4449218 
End bp4449607 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content65% 
IMG OID642733157 
ProductEndoribonuclease L-PSP 
Protein accessionYP_002030336 
Protein GI194367726 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGC GCGATGTCGT TTTCCCCGCC GGCCGCCAGG CCCTGTACGA GCGCAACCGC 
TACTCGCCGG CGATCCGTTC CAATGGCTTC CTGTTCGTCT CCGGCCAGGT CGGCAGCCGC
GAGGATGGTT CGCCTGAGCC GGACTTCGAA GCGCAGGTGC GCCGCGCCTT CGAAAATCTC
AATGCGGTAC TGGCTGCCGC CGGCTGCAGC TTCGATGACG TGGTCGACGT GACCGTGTTC
CTGGTCGACC CCGAGAAGAA CTTCGAGAAG GCCTGGGCGA TCGTGCCCGA GTACTGGGGC
GAGGCGCCGC ACCCGACCCT GACCGGCATC GGCGTGACCT GGCTGTACGG ATTCCAGTTC
GAGATCAAGG TGATCGCGAA GCTGCCGTGA
 
Protein sequence
MSQRDVVFPA GRQALYERNR YSPAIRSNGF LFVSGQVGSR EDGSPEPDFE AQVRRAFENL 
NAVLAAAGCS FDDVVDVTVF LVDPEKNFEK AWAIVPEYWG EAPHPTLTGI GVTWLYGFQF
EIKVIAKLP