Gene Smal_3897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3897 
Symbol 
ID6474781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4387889 
End bp4388791 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID642733100 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002030279 
Protein GI194367669 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.514135 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.679624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA CTCTAGATGA AATGCAGGCG TTCCTTTCGG TGATCGACAG CGGCTCGATC 
AGTGCCGCCG CCGAGCAGCT GGGGCAGACA CCCTCGGGCG TGAGCCGCGC GCTGGGGCGG
CTGGAGGACA AGTTGGGGAT CACCCTGCTG ACCCGTACCA CCCGCCGCCT GCACCTGACC
GCCGAAGGCG AGGCGTTCCT GCGCCATGCG CGGGCGATCA TCGATGCGGT GGAATCGGCC
GAGGAACAGA TGGCGGCGCG CCGCGAGCGC CCGGCAGGGC GCCTGCGCGT GGATGCGGCG
ATGCCGTTCG TGCTGCACGT GATCGCGCCG CTGGTGGCCG GCTATCGCGC GCGTTACCCG
GAAGTGCAGC TGGAGTTGAA CAGTTCCGAC CGCTACATCG ACCTGCTCGA ACGGCGCACC
GATCTGGCGA TCCGGATCGG CCCGCTGGCC GACTCCACCC TGCATGCGCG GCTGCTGGGC
CGCTGCCAGC TGCGGCTGGT GGCCAGCCCG GCCTACCTGG CCAGGCACGG CGAACCGGCC
AGCGTCGCCG CACTGGGCCA GCACACGCTG CTCAGCTTCA ACGAGCCGGA ATCACTCAAC
CGTTGGCCGC TGCCCGGAGA GTCGGATGGG CTGCTGCTGG TGCGCCCGGA TATTGCCGTA
TCCAGTGGCG AGACGCTGCG CCGGCTGGCG GTGGAAGGCG TGGGCATCAC CTGCCTGTCC
GACTTCGTCA CCGATCGCGA CCGCAGCGCC GGCACCCTGG TGCAGGTGCT GGCGGCGCAG
ACGCTGGATG TGTACCAGCC GATCCATGCG GTGTACTACC GCAACACCGC CGTGTCGTCG
CGGATCAGCT CGTTCGTGGA TTACCTGGCC GACGCGATGG CGCAGAGCGA CTACGTGCGC
TGA
 
Protein sequence
MKTTLDEMQA FLSVIDSGSI SAAAEQLGQT PSGVSRALGR LEDKLGITLL TRTTRRLHLT 
AEGEAFLRHA RAIIDAVESA EEQMAARRER PAGRLRVDAA MPFVLHVIAP LVAGYRARYP
EVQLELNSSD RYIDLLERRT DLAIRIGPLA DSTLHARLLG RCQLRLVASP AYLARHGEPA
SVAALGQHTL LSFNEPESLN RWPLPGESDG LLLVRPDIAV SSGETLRRLA VEGVGITCLS
DFVTDRDRSA GTLVQVLAAQ TLDVYQPIHA VYYRNTAVSS RISSFVDYLA DAMAQSDYVR