Gene Smal_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3870 
Symbol 
ID6474753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4357589 
End bp4358386 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content68% 
IMG OID642733072 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002030252 
Protein GI194367642 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATC AGACAACCAC CGTATTACTC GACCCCGCGT TGGCCGATGC CGCCGACGGA 
CCGGTGGTGC TGGCGGCCCG GCTGCGCCAG CACGGTATGC GTCGCACGGC CCGCCACCAG
CATGCACGCG GCCAGCTGCT GGGTGCACAG CAGGGGCTGC TGCGGATCGC CGCCGACGAC
CTACACTGGC TGCTGCCCGC AGGTCACGTC GCCTGGATAC CGCCCTTGCT GCCTCACGCG
CTGCTGAGCG CAGACGGGTT CGATGGCTGG AGCCTGTACT TCAACGCCGA GGCCTGCCTG
GGTCTGCCCT CCACACCGCG CATTTTCCAG CCCAATGCAC TGCTGCAGGC GGCGACAATA
CGTGCGCTGC GATGGCCCCA TCGGCCGCTG GATGCTGCGC AGGCACGACT GGCCGGTGTG
ATCGCCGATG AGATTGCCGC CAGCACGCCT CTGCCGCTTG CCCTGCCACA ACCACGTGAC
CGGCGACTGC AGAAGATCGC CGCCGCACTG GCGCGCGCAC CGCACGACAA CCGCAGCATC
GAGGACTGGG CCACCCGCAG CGGTCTGTCC AGCCGCAGCC TGGCGCGCCA TTGGCTGGCC
GAGACCCACA TGACGCTGAG TCAATGGCGG CAACGCCTGC GGGTGCTGCT GGCACTGCCA
CGCCTGCTGT CCGGCGAGCC GGTGATCAGC GTCGCGCTGT CCATGGGCTA CGACACACCC
AGTGCCTTCA TCGCCGTGTT CAAGCGCGAG ATGGGGGTGA CGCCTGCAAG GTATGGAAAA
GGGGACGGAG GGGATTAA
 
Protein sequence
MADQTTTVLL DPALADAADG PVVLAARLRQ HGMRRTARHQ HARGQLLGAQ QGLLRIAADD 
LHWLLPAGHV AWIPPLLPHA LLSADGFDGW SLYFNAEACL GLPSTPRIFQ PNALLQAATI
RALRWPHRPL DAAQARLAGV IADEIAASTP LPLALPQPRD RRLQKIAAAL ARAPHDNRSI
EDWATRSGLS SRSLARHWLA ETHMTLSQWR QRLRVLLALP RLLSGEPVIS VALSMGYDTP
SAFIAVFKRE MGVTPARYGK GDGGD