Gene Smal_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3848 
Symbol 
ID6474731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4334917 
End bp4336215 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content70% 
IMG OID642733050 
Productprotein of unknown function DUF58 
Protein accessionYP_002030230 
Protein GI194367620 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACCGG CACCGCTGCT GCTGTTGCTG CTGCTGGCCT GGGCCGCGCT GGGCGGCCTG 
GTGCTGGGCG GCGTGCTGCC GCGCTGGAGC TGGGCGCTGG CGGCGCTGGC GATTGCCGTG
CCGGCGTTGA TGGATCTGTG GCGGCAGTCG CGGCGTCCGT CGCCGCAGGT GCAACGCGAG
CTACCCGAGG CGCTGGCACT GGGCGTGCGT CGCGAAGCCG CGCTGCGCCT GCAGGCCGAA
CAATCGATGA CGGTGCAGGT GTTCGACCTG GTGCCCGGCG GCTGGCCGCT GGAATCACTG
CCGCAGCGCG TACGCCTGCA GGGCGGCAGT GCCTCCACCC TGCACTACCA CCTGCAGCCG
CTGCAGCGTG GGCATTTCCG CTTCGAAGGC GTGCACCTGC GCATGCGCTC GCCGTGGCGG
CTGTGGTGGC AGCAACGCAC GCTGCCGCCC GCACTGGACG TGCGGGTCTA TCCGAACTTC
GTGCCGCTCA CCCGGTTTGC GTTGTTCAGT GCCGACCAGG CCTCGCGGCT GGTCGGTGCA
CACGTGAAGC GCCGCCGCGG TGAAGGCACC GACTTCCATC AGATGCGCGA ATACCGCGTG
GGTGACAGCC TGCGCCAGCT CGACTGGAAG GCCACCGCAC GTGCGCGCAA GCTGATCTCG
CGCGAGTACC AGGACGAGAA GAACCAGCAG TTGCTGCTGA TGCTCGACAG TGGTCGGCGC
ATGCTGGCCA GCGAAGGCGG GCTCTCGCAC TTCGACCACG CGTTGAACGC CTCGCTGGTG
GTGGCCTACC TGGCGCTGCG CCAGGGCGAT GCCGCCGGCC TGTTCGCTGC CGGTGGCGAA
CGCCGATGGG TGGCGCCGCA GCGTGGCATG GGCACGGTCG AGCACCTGCT GCGCGCCAGC
TACGACCTGC AGCCGCGTGC GGTGGCCACC GACTATCTGG CCGCCGCCAC CGAGGTATCG
CTGCGACAGC GCCGGCGTGC GCTGGTGATG CTGGTCAGCA ACGTGCGCGA CGAGGACATC
GAAGACCTGC TGGCGGCGGT GCGCCTGCTG CAGCGCCGCC ATCTGGTGTG CGTGGCCAGC
CTGCGCGAAC GCGAACTGGA CGCTGCGCTG GAAGGTGACG TGCAGACCCT GGAAGACGCG
ACCCAGGCCG GTGCCGCTGC ACTGTACCTG CAGCAGCGCG CGAAGGCGCA TGAAGCGCTG
CGCAGCGAGA AGGTGATGGT GCTGGACGTG ACCGCCGATG CCCTGCCTGG TGCGCTGGTG
GAACGCTATC TGGCGGTGAA GCGCGAGGGG TTGCTCTGA
 
Protein sequence
MRPAPLLLLL LLAWAALGGL VLGGVLPRWS WALAALAIAV PALMDLWRQS RRPSPQVQRE 
LPEALALGVR REAALRLQAE QSMTVQVFDL VPGGWPLESL PQRVRLQGGS ASTLHYHLQP
LQRGHFRFEG VHLRMRSPWR LWWQQRTLPP ALDVRVYPNF VPLTRFALFS ADQASRLVGA
HVKRRRGEGT DFHQMREYRV GDSLRQLDWK ATARARKLIS REYQDEKNQQ LLLMLDSGRR
MLASEGGLSH FDHALNASLV VAYLALRQGD AAGLFAAGGE RRWVAPQRGM GTVEHLLRAS
YDLQPRAVAT DYLAAATEVS LRQRRRALVM LVSNVRDEDI EDLLAAVRLL QRRHLVCVAS
LRERELDAAL EGDVQTLEDA TQAGAAALYL QQRAKAHEAL RSEKVMVLDV TADALPGALV
ERYLAVKREG LL