Gene Smal_3840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3840 
Symbol 
ID6474723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4327007 
End bp4327696 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID642733042 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002030222 
Protein GI194367612 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT CCCCCGCTGC GTCCGCGAAG ATCCTGATCG TCGAGGATGA GCCACGCCTG 
GCCTCGGTCC TGCGTGACTA CCTGGCGGCC GCCGGCATGA CCAGCGAATG GGTGGACGAT
GGCGGCCTGG TGATCGACGC GTTCGCGCGC TACCAGCCTG ACCTGGTGCT GCTGGACCTG
ATGCTGCCGC AGCGCGATGG CGTGGACCTG TGCCGCGAAC TGCGCGCAGC CAGCGACGTA
CCGGTGATCA TGGTCACCGC GCGGGTGGAA GAGATCGACC GCCTGCTGGG CCTGGACATC
GGTGCCGACG ACTACATCTG CAAGCCGTTC AGCCCGCGCG AGGTGGTCGC GCGGGTGGTG
GCGGTGCTGC GCCGCTATCG CCCGGACCCC GCTGCACGCG CCAACAGCGG CCTGCACATC
GACGAACCGG CGGCACGCGC CACCTGGAAC GGCAAGGGCC TGGACCTGAC GCCGGTGGAG
TACCGCCTGC TGCGCACCCT GCTGGCCACG CCCGGCCGGA TCTGGGCACG CGATGAACTG
CTCGACCGCC TCTATCTGGA CCATCGCGTG GTGGTCGACC GCACCGTCGA CAGCCATGTG
CGCAACCTGC GCCGCAAGCT GTCCGATGCC GGCATGGAAG GCGAGCCGAT CCGCTCGGTA
TACGGGATGG GTTACAGCTA CGAACCGTAG
 
Protein sequence
MSTSPAASAK ILIVEDEPRL ASVLRDYLAA AGMTSEWVDD GGLVIDAFAR YQPDLVLLDL 
MLPQRDGVDL CRELRAASDV PVIMVTARVE EIDRLLGLDI GADDYICKPF SPREVVARVV
AVLRRYRPDP AARANSGLHI DEPAARATWN GKGLDLTPVE YRLLRTLLAT PGRIWARDEL
LDRLYLDHRV VVDRTVDSHV RNLRRKLSDA GMEGEPIRSV YGMGYSYEP