Gene Smal_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3816 
Symbol 
ID6474699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4297924 
End bp4298862 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content70% 
IMG OID642733018 
ProductROK family protein 
Protein accessionYP_002030198 
Protein GI194367588 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.904203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC TGATCGCCCA CGCCTGCTAC GGCATCGACA TCGGCGGCAC CAAGATCGAG 
CTGGTGGCGT GCGATGCGGC GATGCAGGTC ACCTGGCGCC GCCGGGTGGC CACGCCGCAG
GGCGACTACG ACGGTTTCCT GCAGGCGGTG GTGACCCTGG TCGCCGAGGC CGATGCCGCG
CTGGGCCGCA GTGATGCGGC CATCGGCATC GCTCTACCCG GCGTGCGCGA CCGCCGCAGC
GGCCGCCAGC TCAGCGCGAA CGTGCCTGCG TTGACCGGGC ACAGTGTGGC CGCCGACCTG
CAGGCACGCC TGCAACGTCC GCTGCATTTC GGCAATGACC TGCAGTGCTT TGCCCTGTCT
GAAGCACACG GCGGTGCGGC CGACGGCTAT CCCAGCATGT TCGGCGCCAT CCTCGGCACC
GGCGCGGGTG GTGGTTTCTG CCTGCAGGGC CGCCTGCTGT CCGGTTTCAA CGGGCTGGCC
GGCGAATGGG GCCACTGGAG CGTGCCCGGT CATCTGCTGC AGCGCCACGG CCTGCCGCTG
ATCGACTGCG CCTGTGGCCT GCAGGGCTGC GTGGAGCGCT ATGTGTCCGG CAGCGGCGTG
GCGATGATCG AACGCCACCT CGGTGGCAGC GCCGCAGATG CCAGCGCGGT GATTGCATTG
GCCGAAGCCG GCGACGCCCG CGCGCGCAAG GCGCTGGACA TCCATCGCGA CCTGCTCGGC
CATAGTCTGG CCGCGCTGGT GCTGGCGCTG GACCCGCACG TGATCGTGCT CGGCGGTGGT
CTTTCACAGT ACGCGCCGCT GTACCAGCAG CTGCCCGACG CCATCGCCGC CCATCTGTTC
AAGGGTGTGC AGGTGCCACC GATCGTGCCA CCACGCTTCG GCGATGCCGG TGGCGCACGT
GGTGCTGCCC TGCTCGCCTG CCAACCCTCG TTTTCCTGA
 
Protein sequence
MAELIAHACY GIDIGGTKIE LVACDAAMQV TWRRRVATPQ GDYDGFLQAV VTLVAEADAA 
LGRSDAAIGI ALPGVRDRRS GRQLSANVPA LTGHSVAADL QARLQRPLHF GNDLQCFALS
EAHGGAADGY PSMFGAILGT GAGGGFCLQG RLLSGFNGLA GEWGHWSVPG HLLQRHGLPL
IDCACGLQGC VERYVSGSGV AMIERHLGGS AADASAVIAL AEAGDARARK ALDIHRDLLG
HSLAALVLAL DPHVIVLGGG LSQYAPLYQQ LPDAIAAHLF KGVQVPPIVP PRFGDAGGAR
GAALLACQPS FS