Gene Smal_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3546 
Symbol 
ID6474425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3988528 
End bp3989148 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content67% 
IMG OID642732744 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002029928 
Protein GI194367318 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.726096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC CAGCTGTCGC CAGGCCGCGC ACCAAGCCCG CCGAAACCCG CCAGGAAGAA 
CTGATGGACG CCGCGCAGGC GCTGTTCCTG TCGCAGGGCG TGGAAGCGAC CACCATCAGC
GACATCGTCG CTGCCGCCGA CGTGGCCAAG GGCACCTTCT ATACCTACTT CGCCTCGCGC
ACCGAAATCC TGCAGGCGCT GGCGCAGCGC TATACGCGGC AGTTCATGGA GGAGGTCGAC
CTGGCCGTGC AGCAGCAGCC CGCCAATGAT GGCGTGGCGC GCCTGCGTGC CTGGATCCGC
GCCAACATCG AGCTCTACGT GCGTACCCAC GCGCTGCATG ATGTGGTGTT CGCCAACCAC
CACCATCACC AGCGCGGCAA TGCCGAACGC AGTGCGATCC AGCAGCAACT GCTGGGCATC
CTCGAAGCAG GCAACGCCGC AGGTCTGTGG CAGCTTCCAG CGCCCAAGGT CACCGCCTCG
TTGATCTATG CCGGTGTGCA CGGCGCCACC GACGACCTGA TCGCTGCACC GGCACCGGAT
GCCGATGCCT TCATCGCCGC CGTGCAGGCC GATTGCCTGC GCATGGTCGG CGTGCAACCG
ACCGGTGCCA AACGGCGCTG A
 
Protein sequence
MQTPAVARPR TKPAETRQEE LMDAAQALFL SQGVEATTIS DIVAAADVAK GTFYTYFASR 
TEILQALAQR YTRQFMEEVD LAVQQQPAND GVARLRAWIR ANIELYVRTH ALHDVVFANH
HHHQRGNAER SAIQQQLLGI LEAGNAAGLW QLPAPKVTAS LIYAGVHGAT DDLIAAPAPD
ADAFIAAVQA DCLRMVGVQP TGAKRR