Gene Smal_3539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3539 
Symbol 
ID6474418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3981435 
End bp3982331 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content66% 
IMG OID642732737 
Productpeptidase S41 
Protein accessionYP_002029921 
Protein GI194367311 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0412069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGCG CACTGCTTGC AGCCTCCTGC CCGGCACAGG ATGCGGTGCT GCAGGCGGCG 
GCCACGGCGA TACAGGCGCA GTACCTGGAC GCGGTGGAAG GTGCCCGCAT CGCCGATGCC
CTGCGTGGTT GGTCGAACGA ACAGCGCTAC GCCGATACCT GTGCGGATCC GAAGGCCTTC
AGCGCGCGCC TGAACCAGGA CCTGGACGTA TTCGATGGCC ATTTCCACGT CGAGCGGGTG
GATGCCCACG CCGGACAGGA GGACTGGCTG ATGGCCTGGC GCGCCGACGC CCGCGCCAAC
GGTGCCGGCG TGCGCGAGGT GAAGGTGCTG GAGGGCAATA TCGGTTACCT GCGGCTGAGT
ACCTTCTATC CGCTCGATCT GGCCCGTCCG AAGCTGGAGG CTGCCTTCAC CCTGCTGGCC
GACACCGATG GCCTGGTGCT GGACCTGCGC CAGAACGGCG GTGGTGATGA CGGCAGCGCC
GACCTGCTGG TGCGTACCTT GCTGGAGGCG AACATCACCC AGGTGCAGGC ACTGGATCAG
CGTGGCCGAC GTACGCCGGT GCCGTTGCCA CCGGCGAGCC TGCCGGCGTA CCTGAAGCCG
CTGGTGGTAC TGATCGACCG CCGTACCGGC TCGGCTGCCG AATACGTCGC CTATTCGTTG
CAGGCGCTGG GTCGCGCGCG CATCGTTGGC AGCCGCAGTG GCGGTGCCGC ACATATGTTC
GATGATCCTG TGCTGCTGCC GGATGGCTAT CAGATCAGCA TTCCGGACCG GCAACCGATC
AATCTCCGTA CCGGCGGCAA CTGGGAACGC GCCGGGGTCA CGCCTGATGT CGCCGGCGGA
GACGATCCAC TGTTCGTCGC ACGGCAGTTG CTGGCCACGT CGACATCGTC AAGATGA
 
Protein sequence
MLGALLAASC PAQDAVLQAA ATAIQAQYLD AVEGARIADA LRGWSNEQRY ADTCADPKAF 
SARLNQDLDV FDGHFHVERV DAHAGQEDWL MAWRADARAN GAGVREVKVL EGNIGYLRLS
TFYPLDLARP KLEAAFTLLA DTDGLVLDLR QNGGGDDGSA DLLVRTLLEA NITQVQALDQ
RGRRTPVPLP PASLPAYLKP LVVLIDRRTG SAAEYVAYSL QALGRARIVG SRSGGAAHMF
DDPVLLPDGY QISIPDRQPI NLRTGGNWER AGVTPDVAGG DDPLFVARQL LATSTSSR