Gene Smal_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3457 
Symbol 
ID6476736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3892252 
End bp3892884 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content69% 
IMG OID642732655 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002029839 
Protein GI194367229 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGG CGGTACCCGT GGTGGACGCC AGGGCAGTAC CGGCGTTGTC GGCAATCCGG 
CACTGGGTGT TCGACATGGA TGGCACGTTG ACCGTGGCGA TGCATGATTT CGCGCGGATC
AAGCGCGAAC TGGCGATTCC GGCGCAGGAC GACATCCTCA CCCACCTGGC TGCTCTGCCC
GCTGCAGAGG CCAGTGCCAA GCATGCCTGG CTGCTGGCCC ACGAGCGTGA ACTGGCCGCG
GCCTCCGTGC CGGCGACGGG CGCGGTGGCG CTGGTGCGTG CGCTGCAGGG CGCCGGTTGC
CGGCTGGGCA TCCTCACCCG CAACGTGCGC AACCTGGCCC AGGTCACGCT GCAGGCGATC
GGGCTGGGCG ATGTGTTTGC CGAAGAGGAC ATCATCGGCC GCGACGAAGC CGAGCCCAAG
CCCTCGCCGG ACGGCCTGCA GTACTTCCTG CAGCGCTGGC AGGTGGATCC GGCGCAGGTG
GTGATGGTGG GCGATTACCG CTTCGACCTG GAATGCGGCC GGGCCGCGGG CACGCGCACC
CTGCTGGTCA ATGCCCCGGA CAACCCGTGG CCGGACATGG CCTGCTGGCA CATGGCCGAT
TGTGCGGCGG TGCTGGAGCA CTGGCAGCGC TAG
 
Protein sequence
MTLAVPVVDA RAVPALSAIR HWVFDMDGTL TVAMHDFARI KRELAIPAQD DILTHLAALP 
AAEASAKHAW LLAHERELAA ASVPATGAVA LVRALQGAGC RLGILTRNVR NLAQVTLQAI
GLGDVFAEED IIGRDEAEPK PSPDGLQYFL QRWQVDPAQV VMVGDYRFDL ECGRAAGTRT
LLVNAPDNPW PDMACWHMAD CAAVLEHWQR