Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3457 |
Symbol | |
ID | 6476736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3892252 |
End bp | 3892884 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642732655 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_002029839 |
Protein GI | 194367229 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGG CGGTACCCGT GGTGGACGCC AGGGCAGTAC CGGCGTTGTC GGCAATCCGG CACTGGGTGT TCGACATGGA TGGCACGTTG ACCGTGGCGA TGCATGATTT CGCGCGGATC AAGCGCGAAC TGGCGATTCC GGCGCAGGAC GACATCCTCA CCCACCTGGC TGCTCTGCCC GCTGCAGAGG CCAGTGCCAA GCATGCCTGG CTGCTGGCCC ACGAGCGTGA ACTGGCCGCG GCCTCCGTGC CGGCGACGGG CGCGGTGGCG CTGGTGCGTG CGCTGCAGGG CGCCGGTTGC CGGCTGGGCA TCCTCACCCG CAACGTGCGC AACCTGGCCC AGGTCACGCT GCAGGCGATC GGGCTGGGCG ATGTGTTTGC CGAAGAGGAC ATCATCGGCC GCGACGAAGC CGAGCCCAAG CCCTCGCCGG ACGGCCTGCA GTACTTCCTG CAGCGCTGGC AGGTGGATCC GGCGCAGGTG GTGATGGTGG GCGATTACCG CTTCGACCTG GAATGCGGCC GGGCCGCGGG CACGCGCACC CTGCTGGTCA ATGCCCCGGA CAACCCGTGG CCGGACATGG CCTGCTGGCA CATGGCCGAT TGTGCGGCGG TGCTGGAGCA CTGGCAGCGC TAG
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Protein sequence | MTLAVPVVDA RAVPALSAIR HWVFDMDGTL TVAMHDFARI KRELAIPAQD DILTHLAALP AAEASAKHAW LLAHERELAA ASVPATGAVA LVRALQGAGC RLGILTRNVR NLAQVTLQAI GLGDVFAEED IIGRDEAEPK PSPDGLQYFL QRWQVDPAQV VMVGDYRFDL ECGRAAGTRT LLVNAPDNPW PDMACWHMAD CAAVLEHWQR
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