Gene Smal_3412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3412 
Symbol 
ID6476622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3835381 
End bp3835788 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID642732610 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002029794 
Protein GI194367184 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.544248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTCA GTAGCGCAGG AACAGGCAGC CCGCTGGCGG AGATCAATGT CACGCCACTG 
GTGGATGTGA TGCTGGTGCT GTTGATCATC TTCATCGTGA CCGCGCCGAT CGTGGCCCGG
CCGATTGCCG TGCAGTTGCC ACAGGCCACC GATCGCGTGG TCGACCGTCC CGAACCGCCA
CCGCCGATCG AGCTGCGCCT GGACGCTGCC AACCAGCTCA GCTGGAATGG CCAGCCAATG
GCCATCGGCG ATCTGCAGGC GCGCCTGCAG GTGCAGGCGG GCGAGCATGC CGGCAACCTG
CCGGAGCTGC GCATCGCCAC CGATCCGGCG GCCGAGTACG AAGGCATGGC CCGGATATTG
GCTGCGGCCG AAACCACTGG CGTGGAGCGC ATCGCGTTCG TGCGATAG
 
Protein sequence
MAFSSAGTGS PLAEINVTPL VDVMLVLLII FIVTAPIVAR PIAVQLPQAT DRVVDRPEPP 
PPIELRLDAA NQLSWNGQPM AIGDLQARLQ VQAGEHAGNL PELRIATDPA AEYEGMARIL
AAAETTGVER IAFVR