Gene Smal_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3334 
Symbol 
ID6476462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3742464 
End bp3743882 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID642732532 
Product3-isopropylmalate dehydratase, large subunit 
Protein accessionYP_002029716 
Protein GI194367106 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0065] 3-isopropylmalate dehydratase large subunit 
TIGRFAM ID[TIGR00170] 3-isopropylmalate dehydratase, large subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CACCCCGCAC CCTGTACGAC AAACTGTGGG ACGCCCACGT GGTGGTTCCC 
GAAACCGACA GCGCGCCTGC CGTGCTGTAT ATCGACCTGC ACCTGATCCA TGAAGTGACC
TCGCCGCAGG CGTTCACCGA GCTGCGCGAG CGCGGCCTGG CGCCGCGTCG ACCGGATCGC
ACCAAGGCGA CGATGGACCA CTCCACCCCG ACCCTGCCTG CCGGTGCCGA CGGCAAGCTG
CCCTATGCCA GTGCCGCCTC CGAAGCCCAG GTCGCCACGC TCGCACGCAA CTGCGCCGAA
CATGGCATCG AACTGTTCGA CATGGCCTCG GACAATCGCG GCATCGTCCA CGTGATCGCC
CCTGAGCAGG GTTTCACCCA GCCGGGCATG ACCATCGTCT GTGGTGACAG CCACACCTCC
ACCCACGGTG CATTCGGTTC GCTGGCCTTC GGCATCGGCA CCAGTGAAGT CGGCCACGTA
CTGGCCACCC AGTGCCTGCT GCAGCGCAAG GCGAAGACCC TGGCGATCAG CGTCGATGGC
GCTCTGGCAC CCGGCGTTGG TGCCAAGGAC GTGGTCCTGC ACATCATCGG CGTGATCGGC
GTCAACGGCG GCACCGGCCA CGTGATCGAA TTCCGTGGCA GCACCATCGA AGCGATGGAC
ATGGAACAGC GCATGACCCT GTGCAACATG TCGATCGAGG CGGGCGCGCG CGCCGGCATG
GTCGCGCCGG ACCAGGTGAC GTTCGATTTC GTCGCCGCCA CTCCGCGCGG CCCCAAGGGC
GCCGACTTCG ATGCCGCCGT CGCGCGCTGG CAGCAGCTGC GCAGCGATGA AGGCGCACGC
TTCGACAGCG AAGTGCACAT CGACGCCGCC GATATCCGCC CGACGCTGAC CTGGGGCACC
CATCCCGGCA CCGCCATTGC GGTGGATACG CCGATTCCGG CGGCCAACGA TGCGGCCGCA
CAGAAGGGCC TGGACTACAT GCACTTCGAG GCCGGCAAGG CGCTGGCCGG CACGCCGGTG
GACGTGGTGT TCGTCGGCTC GTGCACCAAC GGCCGCCTGA GCGACATGCG TGAAGTGGCG
CAGGTGCTGC GTGGTCGTCG CGTCGCTGAG CGCGTGCGCA TGCTGGTGGT GCCGGGCTCG
GAGATCGTCA AGCGCGAGGC CGAGGCCGAA GGCATCCACG AGATCGTGCG TGCCGCCGGT
GCCGAATGGC GCGAACCGGG CTGCTCGATG TGCATCGCCA TGAACGGTGA TCTGGTCGCC
CCCGGCCAAC TGGCCGTGAG CACCAGCAAC CGCAACTTCG AAGGCCGCCA GGGGCCCGGT
TCACGCACGC TGCTGGCTTC GCCGATGAGT GCGGCGTGGG CCGCGGTGAA CGGGCACGTT
GCCGATACCC GCGAACTGTT CGCGCAGGAG GTGGCCTGA
 
Protein sequence
MTSAPRTLYD KLWDAHVVVP ETDSAPAVLY IDLHLIHEVT SPQAFTELRE RGLAPRRPDR 
TKATMDHSTP TLPAGADGKL PYASAASEAQ VATLARNCAE HGIELFDMAS DNRGIVHVIA
PEQGFTQPGM TIVCGDSHTS THGAFGSLAF GIGTSEVGHV LATQCLLQRK AKTLAISVDG
ALAPGVGAKD VVLHIIGVIG VNGGTGHVIE FRGSTIEAMD MEQRMTLCNM SIEAGARAGM
VAPDQVTFDF VAATPRGPKG ADFDAAVARW QQLRSDEGAR FDSEVHIDAA DIRPTLTWGT
HPGTAIAVDT PIPAANDAAA QKGLDYMHFE AGKALAGTPV DVVFVGSCTN GRLSDMREVA
QVLRGRRVAE RVRMLVVPGS EIVKREAEAE GIHEIVRAAG AEWREPGCSM CIAMNGDLVA
PGQLAVSTSN RNFEGRQGPG SRTLLASPMS AAWAAVNGHV ADTRELFAQE VA