Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3230 |
Symbol | |
ID | 6476284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3620928 |
End bp | 3622643 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732427 |
Product | hypothetical protein |
Protein accession | YP_002029612 |
Protein GI | 194367002 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGGG CGACGAACAT GCATGGGCGC TGGCCGCTGC AGGTACTGGC GGCACTACTG CTGTGGCTGC CGCTGCTGGC GTGGGCGCAG CCGCGCGCCT GGCTCGACCG CGACCGTGTT GCGATGGGCG ATACGGTCAC CCTCAACGTC GAGAGTGACC AGGGCGCACC CGACTTCAAC CCGTTGCGTA CCGACTTCGA CCTCAGTGGG CAGACCAGCA GCCGCCAGGT GGAGTGGAGC AACGGCGCCA TGCAGCAGCG CAATCTGTAC GGTGTGGCGC TGACGCCGCG TCGCAGTGGT GCGCTGGTCA TTCCCGGCCT GCAGGTGGGC AGCACGCGGA CCGCGCCGCT GACCCTGCAG GTGGACGCCG CCACCGTCGC CGGTCCGGAC AGCAACGCGA TGGCCTTCAT CGAAACCGTT GTCGATGATC AGACGCCGTA CGTGCAGCAG AGCGTAGGCG TGGTGGTGCG GCTGTACTTC GCCTCGCAGC TGGCGTCCGG CGAACTGGTG CTGGATACAC CGGCCGGCGC GTCGTTGCAG CGGGTGGGCG ACGACCGCAC CGACGTGCGC CAGGTCAATG GCCGCCGTTA CAACGTGGTC GAGCGCCGCT TCCTGCTGAT CCCCGAGCGC AGCGGTGCAC TGCGGCTGGC CGGTGCACGC TTCAACGGTC GTAGTGCCGG TGGGTTCTTC GATGATTTCT TTGGCGGCGG CGATGGCCGC ATGAATGCCA CCGGCGCCGA CCGCACCCTG CAGGTGCAGG CACAGCCGGC GCAGGCACCG CAGCCGTGGC TGCCGCTGCA GAGCCTGCAA CTGCGCTACA CCAGCGCGCC GACCAGTGCG CGCAGCGGGG AAGCCGCCAA CATCGTGGTC GAGGCGATTG CCGAAGGCGC GACCCGCGCG CAGTTCACCG ATCTGCCGGT GCCCGAGGTC GGCAGCAATG CGCAGGTGTT TGCCGAGCCG GCACAGTACG AGGAGACCTT CAACGGCAGC ACGCCGCGGC TGAAGATCAC CCGCCGCTAT TCGATCGTGC CGCGCCAGCC CGGTTCGCTG GTGGTGCCGG GGCCGCAGCT GCCATGGTGG GATGTTCGCA GCGGCAAGGC ACAGGAAGCG CGCCTGCCAG ACCTGACGCT GGCCGTTGCA GCGGGCAACG GCGCAAGCAA CGCGCCGCCG GCACCCTTGC CGCCGATCGA CACCGATGCG GCGCTGCCGG GTGCCGATGG CCAGGACAGC CGTATCGCGG CGACCGATCC GCGCGCCAGT GGCCTGTCCG AACGGCCATG GCCGTGGATG GGAGCGGCCA TCGGCCTGGC GTTGCTGTGG CTGCTGACCC TGCTGTGGGG TTGGCAACGT GGCCGTCGCC CGCGTGCGGC GGCGCCGGTG GCGGGTCGCT CGGCTGTGCC GGTTGTGGCG AGCGGGCGTG CCGGTCTGGC CGAACTGCGC CGTGTGCTGG ATGGCGAAGG TTTTGAGCAG GTCGAAGCGC AGCTGTGTGC GATGGCCGGT GTCGAACGTA TCGAGCAGGT CATCGACCGC CTGGCTGACC CCGGACAGCG ACAAGTGCTG CAGGACCTGC AGCAGGCGCG CTGGGGTGGG CAGGGCGACT TGGCGTCGCT GCGTGCGCGC CTGCGCGAGG CCTTCCGTGA CGGACCGCAC TGGTCGGCGG CTGCGGGCAC CGCTGACACT GGTCTGGCGC CGCTGTATCC GCCACGGCGA ACCTGA
|
Protein sequence | MTRATNMHGR WPLQVLAALL LWLPLLAWAQ PRAWLDRDRV AMGDTVTLNV ESDQGAPDFN PLRTDFDLSG QTSSRQVEWS NGAMQQRNLY GVALTPRRSG ALVIPGLQVG STRTAPLTLQ VDAATVAGPD SNAMAFIETV VDDQTPYVQQ SVGVVVRLYF ASQLASGELV LDTPAGASLQ RVGDDRTDVR QVNGRRYNVV ERRFLLIPER SGALRLAGAR FNGRSAGGFF DDFFGGGDGR MNATGADRTL QVQAQPAQAP QPWLPLQSLQ LRYTSAPTSA RSGEAANIVV EAIAEGATRA QFTDLPVPEV GSNAQVFAEP AQYEETFNGS TPRLKITRRY SIVPRQPGSL VVPGPQLPWW DVRSGKAQEA RLPDLTLAVA AGNGASNAPP APLPPIDTDA ALPGADGQDS RIAATDPRAS GLSERPWPWM GAAIGLALLW LLTLLWGWQR GRRPRAAAPV AGRSAVPVVA SGRAGLAELR RVLDGEGFEQ VEAQLCAMAG VERIEQVIDR LADPGQRQVL QDLQQARWGG QGDLASLRAR LREAFRDGPH WSAAAGTADT GLAPLYPPRR T
|
| |