Gene Smal_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3220 
Symbol 
ID6476274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand+ 
Start bp3609376 
End bp3610005 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID642732417 
ProductOmpW family protein 
Protein accessionYP_002029602 
Protein GI194366992 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.185502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.270879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGA CCTCCCCCCT GATCGTGGCC AGCCTGGCCG CCGCCCTGTC CCTCGCCGCC 
GCCCCGGCCA TGGCCCAGTC CAAGGGCGAC TGGACCGTTT CGGCCGGTAT CCACCAGGTG 
GCACCGAAGT CGAACAACGG CTGGCTGGCC AACGGCACCC TGAAGGTCGA TGTCGACAAC 
GACGTCAAGC CGACCATTAC CGGTGAATAC TTCATCGCCG ACAATCTGGG CATCGAAGTG 
CTGGCCGCGC TGCCGTTCAA GCACGACATC AACATCAACG GGCTCGGCCG CGTGGGCAGC 
ACCAAGCAGC TGCCGCCGGT GGTGACCGTG CAGTACCACT TCAACAGCAG GGGCAAGGTG 
TCGCCGTTCA TCGGTGCGGG CGTGAACTAC ACGACCTTCT TCAGCGAAGA CACCACCGGT 
GCGCTGAAGG ACAGCCGCCT GAAGCTGCAG GATTCGTGGG GCCTGGCCGC GCATGCGGGC 
GTGGACTTCG CGATCGGCGA GAAGGGCGCG CTGCGCGTGG ACATGCGCTG GATCGACATC 
GACAGCAAGG TGAAGTTGAA CGGCGAGAAG ATCGGCACGG TCAACATCGA TCCGCTGGTC 
TACGGCGCTT CGTACGTCTT CAAGTTCTAA
 
Protein sequence
MRKTSPLIVA SLAAALSLAA APAMAQSKGD WTVSAGIHQV APKSNNGWLA NGTLKVDVDN 
DVKPTITGEY FIADNLGIEV LAALPFKHDI NINGLGRVGS TKQLPPVVTV QYHFNSRGKV 
SPFIGAGVNY TTFFSEDTTG ALKDSRLKLQ DSWGLAAHAG VDFAIGEKGA LRVDMRWIDI 
DSKVKLNGEK IGTVNIDPLV YGASYVFKF