Gene Smal_3198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3198 
Symbol 
ID6476170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3579230 
End bp3580681 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content66% 
IMG OID642732395 
Productamino acid carrier protein 
Protein accessionYP_002029580 
Protein GI194366970 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1115] Na+/alanine symporter 
TIGRFAM ID[TIGR00835] amino acid carrier protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG AATCCATCGT CAACACCATC CTCGGCATCG TCTGGAGCCC GTACCTGGTG 
GTGCTGTGCC TGCTCGCCGG CCTGTACTTC AGCGTGCGTA CCCGCTTCAT CCAGTTGCGC
GCGCTGCCGG AGATGCTGCG CCTGATGTTC CGGCACGAGC GCTCCGAAGC CGGTGTGTCA
CCGTTCCAGG CCCTGTCGCT GTCGTTGTCC AGCCGCGTCG GCGTCGGCAA CATCGCCGGC
GTCGCCATGG CCATCGCCTT TGGTGGCCCG GGCGCGATCT TCTGGATGTG GATCGTCGCC
TTCCTCGGCG CCTCCAGCGC CTTCATCGAA TCCACGCTGG CACAGATCTA CAAGGACCGC
GATGCCAAGG GCCAGTACCG CGGTGGCCCC GCGTACTACA TCGAAAAAGG CCTGGGCCAG
CGCTGGTATG CAGTGCTGTT TGCGCTGGTC ACCGTGCTGG CCGGTGCGAT GCTGGCCGGT
ACCCAGTCCA ATGCGATCAC CAGCGCGGTG AACGAAGCCT GGGACGTGCC GGTGATGACC
ACCACGGCGG TGCTGCTGGT GGTGCTGGGG GCGATCCTGA TCGGCGGCGT GCGCCGCATC
GCACGGGTGG CCGAATGGGT GGTGCCGTTG ATGGCGGTGG CGTATCTGCT GGTGGCCGCG
CTGGTGATGG TGCTCAATGC AGAGAAAGTG CCGGAGGTGA TCATGCTGGT GCTGCGCAGC
GCATTCGGTG TGGATGCAGC GTTCGGTGCA ATGATCGGCA CCGCCATCCA GTGGGGCGTG
CGCCGTGGTG TGCTGTCCAA CGAGGCCGGC ATGGGCAGCG GTGCGCATCC AGCCGCCGCC
GCCGAGGTCT CGCATCCGGT CAAGCAGGGC CTGGTGCAGT CATTCTCGGT CTACATCGAC
ACGATGGTGG TGTGCAGTGC TACCGCGTTC CTGATCCTGT CCACGGGCCT GTACAACGTC
TACGACCCGG CAGTGAACGG CATTCCGGAT GAGGCGCGCC TGCTGCTGGG CAATCTGCCT
GGCGTCGAGG CCGGGCCGCG CTTCGTGCAG CACGCGGTGG AGTCCGCGCT GCCGGGCTTC
GGCCGTTCGT TCGTGGCGCT GGCGATCCTG CCGTTCGCGT TCACCACCAT TCTGGCGCTG
TACTACATGG CCGAGACCAA TATCAGCTAC CTGTGCCGTG ATCGTCCCGC GCCGTGGGTG
ATGGGCGGGT TCCAGCTGCT GTTCCTGGCC GCGACCGGCT ACTCGGCGGT GAACAGTGCG
ACGATCGCGT GGTCGCTGGG CGACATCGGC GTCGGCCTGA TGAGCTGGTT GAACATCATC
GCCATCCTGC TGCTGCAGAA GCCGGCGCTG GCGGCGCTGC GCGACTACGA ACAGCATCGC
CAGGCGGGCA AGGATCCGCT GTTCAATCCG AAGCTGCTGG GTGTGCGCAA CACCAGCGTG
TGGGAGGGCT GA
 
Protein sequence
MNIESIVNTI LGIVWSPYLV VLCLLAGLYF SVRTRFIQLR ALPEMLRLMF RHERSEAGVS 
PFQALSLSLS SRVGVGNIAG VAMAIAFGGP GAIFWMWIVA FLGASSAFIE STLAQIYKDR
DAKGQYRGGP AYYIEKGLGQ RWYAVLFALV TVLAGAMLAG TQSNAITSAV NEAWDVPVMT
TTAVLLVVLG AILIGGVRRI ARVAEWVVPL MAVAYLLVAA LVMVLNAEKV PEVIMLVLRS
AFGVDAAFGA MIGTAIQWGV RRGVLSNEAG MGSGAHPAAA AEVSHPVKQG LVQSFSVYID
TMVVCSATAF LILSTGLYNV YDPAVNGIPD EARLLLGNLP GVEAGPRFVQ HAVESALPGF
GRSFVALAIL PFAFTTILAL YYMAETNISY LCRDRPAPWV MGGFQLLFLA ATGYSAVNSA
TIAWSLGDIG VGLMSWLNII AILLLQKPAL AALRDYEQHR QAGKDPLFNP KLLGVRNTSV
WEG