Gene Smal_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3164 
SymbolsucC 
ID6476135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3543069 
End bp3544238 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content62% 
IMG OID642732360 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_002029546 
Protein GI194366936 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.768074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC ACGAATACCA GTCAAAACAA CTGCTTGCCG AGTACGGCAT CCCGGTCCCG 
GCCGGCAAGG TCGCTGCGAC CCCGGACGAA GCGGTTGCCG CTGCCAACTC CCTGGGCCAG
GGCCCCTGGA TGGTCAAGGC GCAGATCCAC GCTGGCGGCC GCGGCAAGGC TGGCGGCGTC
AAGTTCTGCA AGACCACCGA CGACGTGAAG GCCGCTGCGG CCAAGATGCT CGGCACCAAG
ATGGCCACCT ACCAGACCGC TGGCGTTGAA CTGCCGGTCA ACCTGGTGCT GGTGACCACC
GCTGGCGAGA TCGTCAAGGA ACTGTACCTG TCGGTGCTGG TTGACCGTGG CACCAAGACC
ATCACCTACA TCGCTTCTTC GGAAGGCGGC GTGGAGATCG AGCAGGTCGC TGCTGAAACC
CCGGAGCTGA TCCACTCGCT GAACGTCGAC TTCGTCGAAG GCGTGCAGGG TTACCACGGC
CGTGATTTCG GCTTCAAGCT GGGCCTGACC GCCAAGCAGG CCGGCCAGTT CGCCAGCATC
ATGGTGAACC TGTACCGCCT GTTCAACGAA AAGGACCTGG CGCTGGTTGA AATCAACCCG
CTGGCCATCC TGGACGACGG CAACCTGTAC GCGCTGGACG GCAAGTTCGA CAGCGACGAC
AACGCCGCGT TCCGCCAGAA GGCCCTGGTC GCCATGCGCG ACAAGACCCA GGAAGATCCG
ACCGAAGTGA TCGCTTCGGA GCTGGACATC AACTACGTCA CCATGGACGG CAACATCGGC
TGCATGGTCA ACGGCGCAGG CCTGGCCATG GCCACCATGG ACGTCATCAA GCTCAACGGC
GGCGAGCCGG CGAACTTCCT GGACGTGGGC GGCGGTGCCA ACAAGCAGCG CGTCATCGAA
GCCTTCAAGC TGATCCTGTC CTCGGACAAG GTCGAAGGCA TCTTCGTCAA CATCTTCGGC
GGCATCGTCC GCTGCGACAT GATTGCCGAA GGCATCATCG CCGCCGTGAA GGAAGTGGGC
GTCAAGGTTC CGGTCGTGGT GCGCCTGGAA GGCACCAACG TGGAAGAAGG CAAGCAGCTG
CTGCGTGACA GCGGCATGGC CATCATCCCG GCTGACAACA TCAACGATGG CGCCAAGAAG
ATCGTTGAAG CTGTCAAGAA CGCTGCCTGA
 
Protein sequence
MNFHEYQSKQ LLAEYGIPVP AGKVAATPDE AVAAANSLGQ GPWMVKAQIH AGGRGKAGGV 
KFCKTTDDVK AAAAKMLGTK MATYQTAGVE LPVNLVLVTT AGEIVKELYL SVLVDRGTKT
ITYIASSEGG VEIEQVAAET PELIHSLNVD FVEGVQGYHG RDFGFKLGLT AKQAGQFASI
MVNLYRLFNE KDLALVEINP LAILDDGNLY ALDGKFDSDD NAAFRQKALV AMRDKTQEDP
TEVIASELDI NYVTMDGNIG CMVNGAGLAM ATMDVIKLNG GEPANFLDVG GGANKQRVIE
AFKLILSSDK VEGIFVNIFG GIVRCDMIAE GIIAAVKEVG VKVPVVVRLE GTNVEEGKQL
LRDSGMAIIP ADNINDGAKK IVEAVKNAA