Gene Smal_3091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3091 
Symbol 
ID6475990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3454455 
End bp3455339 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content71% 
IMG OID642732286 
ProductTonB family protein 
Protein accessionYP_002029473 
Protein GI194366863 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.370908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCCG CACCTGCCGT CCTGCCCCCG CCGCCGCGCG AAGCGCAACG GCTGGGGGCG 
ACCATCGCGC TGTCGGTCCT GGTCCACGCC CTGCTGATCC TGGGCGTGGG CTTTGCCGTG
AAGGGCGATG CGCCGCTGGT GCCGACGCTG GAAGTGATCT TCAGCCAGAC CCGCACCGCA
CTGACGCCCA AGCAGGCCGA TTTCCTGGCC GCGGCCAGCC AGGAGGGCGG CGGCGAGCAC
GACCGCGCAC AGCGCCCGCG CGACAACCAG GCCGGCATCG TGCCGCAGGC CCAGTCCGGG
CTGAGCCCGG TGCCGCAACA GCAGCAATCG GCCGCGCCCG TGCCACCGCC GCAGGCGCGG
GTGGTCAGCA GCCGCAATGG CGAGGACACA GTGGTGCAGG CGCAATCGCG CCCCACCCCG
CTGGAGCCGA CGCCGGATGC GCCGATGACC GCGCGCGAAC AGCGTGATGC GGAAATGGCG
CGCCTGGCAG CGGAAGTGCA CCTGCGTTCT GCGCAGTACG CCAAGCGCCC GAACCGAAAA
TTCGTCTCCG CCAGTACGCA CGAATATGCC TATGCCAATT ACCTTCGCGC GTGGGTCGAC
CGCGCCGAGC AGGTGGGCAA CCTGAACTAT CCGGACGAGG CGCGGCAGCG CCGTCTCGGC
GGCCAGGTGG TGATCAGCGT GGGCGTGCGC CGCGATGGCA GCGTGGAAAG CAGCCGCATC
CTGCGTTCGA GCGGGACGCC GTTGCTGGAC GAAGCTGCGC TGCGGGTGGT GCAGCTGGCA
CAGCCGTTCC CGCCGCTGCC GAAGACCGAA GACGAGATCG ATATCCTGCA GGTCACGCGT
ACGTGGGTGT TCCTGCCGGG CGGCGCCCTG CGCGACGATC GGTAG
 
Protein sequence
MPPAPAVLPP PPREAQRLGA TIALSVLVHA LLILGVGFAV KGDAPLVPTL EVIFSQTRTA 
LTPKQADFLA AASQEGGGEH DRAQRPRDNQ AGIVPQAQSG LSPVPQQQQS AAPVPPPQAR
VVSSRNGEDT VVQAQSRPTP LEPTPDAPMT AREQRDAEMA RLAAEVHLRS AQYAKRPNRK
FVSASTHEYA YANYLRAWVD RAEQVGNLNY PDEARQRRLG GQVVISVGVR RDGSVESSRI
LRSSGTPLLD EAALRVVQLA QPFPPLPKTE DEIDILQVTR TWVFLPGGAL RDDR