| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3031 |
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| Symbol | |
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| ID | 6475848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3382255 |
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| End bp | 3383838 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642732226 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002029413 |
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| Protein GI | 194366803 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.265414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGC CCCGATCACC CCTGCGCCAC GCCGATACCG ACCCCGGCCG CCCGGTGATC
TGGACCGTCA GCGTCTCGCG GCTGACCGGC CTGCTCGGCG ACGTCATTCC CGAGTTCGAC
CGCCGCGCAC GCATCGAGCA GATCAACCTC GGCTTCGAGG AAGCGGTGGA CGTGATCGGG
CAGCGCCTGC GTCGCGAGCA CTGCGATGTG GTGATCGCCG GCGGCTCCAA TGCGGCGTGG
CTGCGTGGTC GGCTGGAGCT GCCGCTGGTG CCGATCCAGG CCAACGGCTT CGACCTGATG
GAAGCACTGG CGCGCGCGCG ACGCATCGCT CCGCGCATCG GCCTGGTCAC CCACGCCAGC
GATGTACCAG TGTTCAGCAA CTTCCAGCAG AGTTTCGGCC TGGATATCGA ACATCGCCGC
TTCGTCACCC GCGAGGACGC ACGAGACTGC ATCGCCGACC TGCGCGCCAA CGGCATCGAG
GTGATCGTCG GCACCGGCAT GGCCATCGAC CATGCAGAAC AGGCCGGTCT GCCCGGGGTG
CTGCTGTATT CGGCCGACTC GGTGCGGCAG GCGTTCGAAC ATGCGCTGGA ACTGACCCAG
ACCCTGGCAC GTTCCGGCAG CAACCGCCCT GCCCCGCGCC GGCGCCCGGC AGCGCGTGCC
GATGCGCATG AACTACTCGG CGACAGCGAC GCGATGGCGC AGGTGCGCGC GCAGATCGCG
CTCTACGCCC CACATGACAG CACCGTGCTG GTCAGCGGCG AAACCGGCAC CGGCAAGGAA
CTGGTGGCGC GCCAGCTGCA CGCCGCCAGC GGTCGTCGCG GACGCTTCGT GGCACTGAAC
TGCGGCGCGA TCAGCGAATC GCTGCTGGAA GCGGAGCTGT TCGGCTACAG CGATGGCGCC
TTCACCGGCG CGCGGCGTGG TGGCCGTGTT GGCCTGGTCG AGGCGGCAGA TGGCGGCACC
CTGTTCCTGG ACGAAATCGG CGAACTGCCG CTACCGCTGC AGACCCGACT GCTGCGGGTG
CTGGAGGAAC GCGAAGTGCT GCGCGTCGGC GCCACCGAAC CCACGCCCGT GGATCTGCGC
GTCGTCGCTG CCACGCTGCA GTCACTGGAA CAACGTGCCG CCGCCGGAAG TTTCCGCCGT
GATCTGTATT ACCGCCTGGC CGCGCTGCGT ATCGCGCTGC CTTCGCTGCG TGCGCGGCAC
AGCGATATCC CGCTGTTGGC GCAGCACTTC TTCCGCCAGC TGCGTGGCAT CGATGCGCCA
CTGGATGAGG ATGCGCTGGC GGTGCTGACC GCCGCACGTT GGCCCGGCAA CGTGCGCGAA
CTACGCAATC TGGTGGATCG CCTGCGCATC CACTGGCAGC CCGGTGAAGG GCTGATTGAT
GCCGCGCGAC TACTGCAGCT GGCGCCCGAA CTGGTGAATG AAGGCGTTTC AGCATTGCCG
GTGGAAAGCA ACGGCAAGCG CCCACCGCGT GCGCAACTGG AAACGCTGCT GCAGGAACAT
CGCAATGATC GCGAGGGGAT GGCGCAGGCG CTGGGTGTAT CGCGCACCAC GCTGTGGCGC
TGGCTGCGCG CGGAAGGCCT GTAG
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| Protein sequence | MYLPRSPLRH ADTDPGRPVI WTVSVSRLTG LLGDVIPEFD RRARIEQINL GFEEAVDVIG
QRLRREHCDV VIAGGSNAAW LRGRLELPLV PIQANGFDLM EALARARRIA PRIGLVTHAS
DVPVFSNFQQ SFGLDIEHRR FVTREDARDC IADLRANGIE VIVGTGMAID HAEQAGLPGV
LLYSADSVRQ AFEHALELTQ TLARSGSNRP APRRRPAARA DAHELLGDSD AMAQVRAQIA
LYAPHDSTVL VSGETGTGKE LVARQLHAAS GRRGRFVALN CGAISESLLE AELFGYSDGA
FTGARRGGRV GLVEAADGGT LFLDEIGELP LPLQTRLLRV LEEREVLRVG ATEPTPVDLR
VVAATLQSLE QRAAAGSFRR DLYYRLAALR IALPSLRARH SDIPLLAQHF FRQLRGIDAP
LDEDALAVLT AARWPGNVRE LRNLVDRLRI HWQPGEGLID AARLLQLAPE LVNEGVSALP
VESNGKRPPR AQLETLLQEH RNDREGMAQA LGVSRTTLWR WLRAEGL
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