Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3002 |
Symbol | |
ID | 6475819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3346727 |
End bp | 3348094 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732197 |
Product | amino acid permease-associated region |
Protein accession | YP_002029384 |
Protein GI | 194366774 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.993611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0187345 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACT CGATTCCGAC CGCTTCGCCG TCCCGCCTCG GACATTCGCT CAAGCCCCGC CAGCTGATCA TGATGGGCCT GGGCAGCGCC ATCGGCGCCG GCCTGTTCCT CGGCTCGGGC GTGGGTGTGC AGGCGGCCGG CCCGGCGGTG CTGGTGTCGT ATCTGGTCGC TGGTGCTCTG GTGATCATCG TGATGAACGC ACTGGGCGAG ATGGCGGCGG CCAAACCAAC CAGTGGTGCG TTCTCGGTAT ATGCAGCCGA CGCCATGGGC GCTACCGCCG GCGCTACCGT GGGCTGGCTG TGGTGGGTGC AGCTGGTGAT CGTGATCGCC GCCGAAGCCG TCGGCGCGGC CGGGCTGCTG GCCTCGGTCT GGCCGGTGAT ACCGGTGCCG ATGGCCGCGT TGGCCTTCAT GCTGTTCTTC ACCGCGATCA ACCTGCTGGG AGTGAAGAAC TTCGGCGAGT TCGAATTCTG GTTCGCCATC CTCAAGGTGG CGGCGATCCT GGCCTTCATC GCCATCGGCG TGGCGCTGCT GATGGGCTGG CTGCCGCAGG TGACCTCGCC GGGCCTGAGC AACTTCACCG AACACGGTGG CTTCGCCCCG AAGGGCCTGG CCGGGATCGG TGCGGCGTTG CTGGTTGTCG TTTTTGCCTT CGGTGGCACC GAGATCGTGG CCGTTGCGGC GGCCGAGACC GAAGATCCGG AGCGCAGCAT TGCCCGTGCC ATTCGTACCG TGGCCTGGCG CATCCTGGTG TTCTACATCG GCTCGCTGAG CGTGATCATC GCCGTGGTGC CGTGGACCAG CGAGGCGCTG AAGTCGCCGT TCGCTGCGGT GCTGGATATC GCCCGCATTC CGGGCGCGGG TACGGCCATC ACCCTGATCG CGGTGATCGC GCTGTTGTCG GCGCTCAATG CCAACCTCTA CGGCGCCTCG CGCATGATGT ACTCGCTGGC GCAGCGCCGC GAAGCCCCGG CCGTGTTGGG CTGGACCGAC CCGCGCCAGG TACCGGTGAT CGCCGTGCTG GCCAGCGTGC TGTTCGGCTT TGCCGCCACG GTGATGGAAC TGCTGTTCCC GGATCGGGTG CTGCCGGTGC TGCTGAACAT CGTCGGTTCC ACCTGTCTGC TGGTGTGGAC GCTGTCGCTG GTTTCGCAGC TGGTGCTGCG CCGCCGTGCC GACCGACTGG GTACCCGCCT GCCGTTCCGC ATGGCCGGAT TCCCGTGGCT GACCGTCTGT GCGCTGGCGA TCCTGGCACT GATCTTCGGC CTGCTGCTGA GCGAATCGCA CACCCGCCTG CAGTTCCTGT CGATGGTGGC GCTGACTGCC ACGATCGCCG CCAGCAGCGC CATCGCACGG CGCATGCGCG AGGCGTGA
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Protein sequence | MPNSIPTASP SRLGHSLKPR QLIMMGLGSA IGAGLFLGSG VGVQAAGPAV LVSYLVAGAL VIIVMNALGE MAAAKPTSGA FSVYAADAMG ATAGATVGWL WWVQLVIVIA AEAVGAAGLL ASVWPVIPVP MAALAFMLFF TAINLLGVKN FGEFEFWFAI LKVAAILAFI AIGVALLMGW LPQVTSPGLS NFTEHGGFAP KGLAGIGAAL LVVVFAFGGT EIVAVAAAET EDPERSIARA IRTVAWRILV FYIGSLSVII AVVPWTSEAL KSPFAAVLDI ARIPGAGTAI TLIAVIALLS ALNANLYGAS RMMYSLAQRR EAPAVLGWTD PRQVPVIAVL ASVLFGFAAT VMELLFPDRV LPVLLNIVGS TCLLVWTLSL VSQLVLRRRA DRLGTRLPFR MAGFPWLTVC ALAILALIFG LLLSESHTRL QFLSMVALTA TIAASSAIAR RMREA
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