Gene Smal_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2980 
Symbol 
ID6475797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3318414 
End bp3319295 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content74% 
IMG OID642732175 
Productanti sigma-E protein, RseA 
Protein accessionYP_002029362 
Protein GI194366752 
COG category[T] Signal transduction mechanisms 
COG ID[COG3073] Negative regulator of sigma E activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0282228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0420936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTA ATCCGTTCAA CGAATCGCAG AACCATCAAT CCCCTGCCGG GCAGCGCCTG 
GACCAGCGCC ACCGCGAGCA GCTGTCGGCG CTGGTCGATG GCGAGCTGGG CGCAGATGAA
GCGCGCTTCC TGCTGCGCCG CATGGAACAT GACCCCGAAC TGGCAGGCTG CCAGGAACGC
TGGCAGCTGC TCGGCGACGT GATGCGCGGC CAGGCCTCGC TGCTGGCGCC TGTCGGCTTC
GGTGCCGCTG TGGCCGCCGC CATTGCTGCC GAACCCGCAC CACAGGCGGA GCCGCGCCGT
CAGGTGCGGC GTAGCGGCTG GCGGGCCTGG GGCGGTGGTG CTGCACTGGC CGCCTCGGTG
GCGGCAGTGG CCCTTTTCAT GGGCGGCGAG AAGCTGCAGG AGGCCACGCC GGGCGAGCCG
CTGGCGCCGC AGGTGATCGC CAGTCAGGCC GAGCTGGCGC CGGCACCGGG CACCCCGGCT
CCGGTCACCG AAGCCTCGGT GGATACCGCA GCGATGGCGG TGGCTGCTGC GCCGGCGGTG
GCGATGGCCG CTGCCGGCCG CCGCCAGGAC ACCCGCCGTG CCAGTGCGAC CCGCAGCCAG
CAGGCCGCGC GTGCCGCGCA GCGTGACGAT GTACCGCAGC GTGCCGTGGC TGCCGCGCAG
GCGCCGTTGA CCCCGAGCGT GCCGGCCAAC GCCAGCCGCA ACCTGCCGTT CGGTGAGGTC
GGTGGCCTGC AGGCGCGACC GTGGCCGCGC TCCAGCCTGG CGCCCGCCGC CGGTGGCGCG
CTCAATGCCA GCTTCCCGGC CCACGCCGGT GGTGCCGCGT TCTACCCGTT CGAGCCGCGC
CTGCAGGATG ACCTGCCGGT GCCGCCGCGC CCGCGCGACT GA
 
Protein sequence
MTSNPFNESQ NHQSPAGQRL DQRHREQLSA LVDGELGADE ARFLLRRMEH DPELAGCQER 
WQLLGDVMRG QASLLAPVGF GAAVAAAIAA EPAPQAEPRR QVRRSGWRAW GGGAALAASV
AAVALFMGGE KLQEATPGEP LAPQVIASQA ELAPAPGTPA PVTEASVDTA AMAVAAAPAV
AMAAAGRRQD TRRASATRSQ QAARAAQRDD VPQRAVAAAQ APLTPSVPAN ASRNLPFGEV
GGLQARPWPR SSLAPAAGGA LNASFPAHAG GAAFYPFEPR LQDDLPVPPR PRD