Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2980 |
Symbol | |
ID | 6475797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3318414 |
End bp | 3319295 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642732175 |
Product | anti sigma-E protein, RseA |
Protein accession | YP_002029362 |
Protein GI | 194366752 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3073] Negative regulator of sigma E activity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0282228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0420936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTA ATCCGTTCAA CGAATCGCAG AACCATCAAT CCCCTGCCGG GCAGCGCCTG GACCAGCGCC ACCGCGAGCA GCTGTCGGCG CTGGTCGATG GCGAGCTGGG CGCAGATGAA GCGCGCTTCC TGCTGCGCCG CATGGAACAT GACCCCGAAC TGGCAGGCTG CCAGGAACGC TGGCAGCTGC TCGGCGACGT GATGCGCGGC CAGGCCTCGC TGCTGGCGCC TGTCGGCTTC GGTGCCGCTG TGGCCGCCGC CATTGCTGCC GAACCCGCAC CACAGGCGGA GCCGCGCCGT CAGGTGCGGC GTAGCGGCTG GCGGGCCTGG GGCGGTGGTG CTGCACTGGC CGCCTCGGTG GCGGCAGTGG CCCTTTTCAT GGGCGGCGAG AAGCTGCAGG AGGCCACGCC GGGCGAGCCG CTGGCGCCGC AGGTGATCGC CAGTCAGGCC GAGCTGGCGC CGGCACCGGG CACCCCGGCT CCGGTCACCG AAGCCTCGGT GGATACCGCA GCGATGGCGG TGGCTGCTGC GCCGGCGGTG GCGATGGCCG CTGCCGGCCG CCGCCAGGAC ACCCGCCGTG CCAGTGCGAC CCGCAGCCAG CAGGCCGCGC GTGCCGCGCA GCGTGACGAT GTACCGCAGC GTGCCGTGGC TGCCGCGCAG GCGCCGTTGA CCCCGAGCGT GCCGGCCAAC GCCAGCCGCA ACCTGCCGTT CGGTGAGGTC GGTGGCCTGC AGGCGCGACC GTGGCCGCGC TCCAGCCTGG CGCCCGCCGC CGGTGGCGCG CTCAATGCCA GCTTCCCGGC CCACGCCGGT GGTGCCGCGT TCTACCCGTT CGAGCCGCGC CTGCAGGATG ACCTGCCGGT GCCGCCGCGC CCGCGCGACT GA
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Protein sequence | MTSNPFNESQ NHQSPAGQRL DQRHREQLSA LVDGELGADE ARFLLRRMEH DPELAGCQER WQLLGDVMRG QASLLAPVGF GAAVAAAIAA EPAPQAEPRR QVRRSGWRAW GGGAALAASV AAVALFMGGE KLQEATPGEP LAPQVIASQA ELAPAPGTPA PVTEASVDTA AMAVAAAPAV AMAAAGRRQD TRRASATRSQ QAARAAQRDD VPQRAVAAAQ APLTPSVPAN ASRNLPFGEV GGLQARPWPR SSLAPAAGGA LNASFPAHAG GAAFYPFEPR LQDDLPVPPR PRD
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