| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2950 |
|---|
| Symbol | |
|---|
| ID | 6475697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3284599 |
|---|
| End bp | 3285297 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642732145 |
|---|
| Product | RNA-binding S4 domain protein |
|---|
| Protein accession | YP_002029332 |
|---|
| Protein GI | 194366722 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.138382 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGA CCCGTCTCGA CAAACGCCTG TCCGCCCTGC TCGGCATCCC GCGCGGTGAA
GCCCGGCGCT ACATCGAAGG CGGCTGGGTC AGCGTCAATG GCGAGGTGGT CGAGCAGCCG
CAACGCCCGG TCGACGAGAG TGCGGTGATC GTGGTGGCCG AACAGGCCAG CGATGACAAG
GCCGAGCGGG TCACCATGCT GCTGCACAAG CCCGCTGGCG TCGCGGCCGA AGCGCTGTGT
GCCTTGATCA GCAGCGACAG CCGCAGCGAA CTTGATGCCA GCGGCACCCG CCCGTTGCAG
CGCCATTTCC ATGGACTGCA GCTGGCTGCC GCGCTTCCGG CCAGCGACAG CGGCCTGGTG
GTGGTCAGCC AGGACCCGGC GACGCTCGCC CACCTGCAGC GTAATCTCGG CCGCACCGAG
CAGGAGTACC TGATCGAAGT GGCTGAAGGC GGACCCGAAC GCGGTCCCTG GTTGATGGCG
CGGCTGCAGC ACGAATCCGG CGGAGCCAAG GTCAGCTGGC AGAGCGAGCA GCGCCTGCGC
TTCGCTGGCA AAGGCCTGAC CGCCAAGGGA CTGCGCGTGG CGGTCGGCGC CGCGGGGCTG
CAGGTTGCCG CAGTGCGCCG CCTGCGCATC GGCCGCGTGG CGCTGGGGCC GCTGCCGCCG
GGGCAGTGGC GCTACCTGGG CAGCGACGAG CGGTTCTGA
|
|---|
| Protein sequence | MEPTRLDKRL SALLGIPRGE ARRYIEGGWV SVNGEVVEQP QRPVDESAVI VVAEQASDDK
AERVTMLLHK PAGVAAEALC ALISSDSRSE LDASGTRPLQ RHFHGLQLAA ALPASDSGLV
VVSQDPATLA HLQRNLGRTE QEYLIEVAEG GPERGPWLMA RLQHESGGAK VSWQSEQRLR
FAGKGLTAKG LRVAVGAAGL QVAAVRRLRI GRVALGPLPP GQWRYLGSDE RF
|
|---|
| |