| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2871 |
|---|
| Symbol | |
|---|
| ID | 6477370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3193005 |
|---|
| End bp | 3195812 |
|---|
| Gene Length | 2808 bp |
|---|
| Protein Length | 935 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642732066 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002029254 |
|---|
| Protein GI | 194366644 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTACG TAAGCAACAC CGCACGTCGC AACACGCTCG CCGTCGCCCT GATTTCCGCC
CTGATGGCCG CCGCCCCGGC AATGGCCCAG GACAAGGCGA CCAACCTGGA CAAGATCACC
GTCACCGGTT CGCTGATCCC GCAGACCCAG GTTGAAACCC AGACCCCGGT GATGTCCATC
ACCGCCGAAG ACATCCAGAC CCGCGGCTTC AGCAGTGTTG CTGAAGTGCT GCAGCAGTCG
TCGCTGACCA CCGGCGGCCT GCAGGGCGGC CAGACCTCGG GTTCATTCAC CCAGGGCGCC
GAAGCCGCCG GCATGTTCGG CCTGAATCCG GGCTACACCA AGTACCTGAT CAACGGCCGC
CCGATGCTCT CGTATCCGGC GCTGTACAAC GGCAGCGAAA CCTTCAACAA CATCAGCGGC
ATTCCGATCG ACATCGTCGA GCGCATCGAA GTGCTGCCGG GCGGCCAGTC CTCGCTGTAC
GGCTCGGACG CGATCGCCGG CGTGGTCAAC ATCATCCTGA AGGAGCGCAT GGACGGCGGC
ACGATGACCG TCCGTGGTGG CACCTACACC GAAGGTGGCG GCAGCAACAT CCGCTTCAGC
GCCGCCAAGG GCTTCAACGC GTTTGACGAC CGCTTCCACG CGCTGGTCAA CGTGCAGATC
GAAAACGGCA GCCCGATCTG GGGCTACCAG CGTGACATCA CCAAGCAGAC CAACCCGGTC
GGCTACACCG CCCAGGTGCC GTCGAACGAC TTCGCCGTCA TCACCAACGC TGACAACAAG
CTGTTGATGA TGGACCCGAC CCGCTGCGCC AATGTCGCGG GCCTGTACGA CGGCACCACC
GTGGTCGGCC AGCGCCCGTC GGGCGAATCC TGCGGCTCGG TGTACAGCGC CGGCTACAAG
ACCCTGAAGA ACGGCAAGAA CAGCGGCCAG TTCTACTCGT CGATGACCTT CGACGTGAAC
GACAACTTCC AGCTGTTCGC CGACGTGCTG TACAGCAAGG AAAAGACCGA GTTCACCTCC
GGCTCCAGCG CCCTGTGGTG GGGCACCAAG TCGGTCATGG GCGGTTTCTA CGACCAGGGC
CTGGGCAAGG TCGTGAACCT GCAGCGCGCC TTCGCGCCGG AAGAAATCGG TACGGGCGAC
TACAACAACA TCCTGAACTC CGATGAGAGC CGCGCCTACC AGGTCACCCT GGGCGGCAAG
GGCATGGTCG GCGATTGGGA TTACAGCGCC AGCTTCACCC GCGGCGAGTA CCGCCTGGAC
CAGAACCGCT TCGTGCGCTG GAAGGACAAG ATCGAAGACT TCTTCGGCCA GACCGTGCTG
GGCCCGCGCC TGGGCACCCA CACCGACCCG AAGGATCCGA CCGCCCAGTT CGGCATCTAC
AGCCCGAACT ACGCTGCCTT CTACTCGCCG ATCACCCCGG ACCAGTTTGC CAGCTTCACC
GGCTACGGCA CCCACCGCAG CAAGACCTGG CAGAACCTGG GTCGCGTGCA GGTGACCAAC
GGTTCGCTGT TCAGCCTGCC GGGCGGTGAC GCCGGCCTGG CCGTTGTGCT GGAAGGTGGC
AGCGAAGGCT GGGACTATTC GCCGGATCAG GCGTTCGTCG ACGGCAACGT GTGGGGCACC
ACTGCCGTCG CCGGCGCCGG TCACCGCAGC AACTATGCGG TCACCAGCGA ACTGCGCATG
CCGCTGCACG ACAAGCTGAC TGTCAGCGCG TCGGGCCGCT ATGACGCCTT CAAGATCGCC
GACAAGACCG TCGACAAGGC CACCTACAGC ATTGGCCTGG AATTCCGTCC GATCGAGAGC
CTGCTGCTTC GCGGCAAGTA CGGTACCGCC TTCCGCGCAC CGACCCTGTC CGATGCCTTC
CAGGGCATGA GCGGCTCGTA CGCCTCCAGC CAGAACGACT ACTACCGCTG CAGCCAGCTG
GGCTACGGCC TGCGTGACGA GGCCTGCTCC TTCTACAAGG GCACCTCGGT GTACAGCGAA
AAGTCCGGCA ACCCGGACCT GAAGCCGATC ACCGCCGATG TGTGGAGCGC AGGCGTGGTG
TGGGCCCCGG TCAGCAACTT CTCGCTGTCG GCCGACTACT ACAACTGGAA GATCAAGAAC
GAGGTCAAGA CCCTCAGCAG CGATCAGCTG CTGCTGGCCG AGTACCAGTG CCGCAACGGC
CTGCCGAACA ACACCTCGGC CAGCTGCGGG AACGTGACCG ACTGGGTGTC CCGCGATGCC
GGCGGCAACC TGACCCGCGT GTACACGCCG AAGCTCAACG TTGCCAGCCA GAACCTGGAA
GCGGTGACCG TGGCGGCCAA GTACCAGCAG GATATCGGCC GCTTCGGCTC GCTGATGTTC
TCCGGCAACT ACACCAACAT GCTGAAGCGT GAAGTTCAGC CGATGCCGGG TGCCGCCAAG
CTCGACCTGC TGAGCGATCC GTACAACATG TGGTACTACG ACAACTTCGC CAAGGTTCGC
GGCGATCTGT CGGTGGCATG GAACATCGCC AAGTTCACCA CCACTGTGTA CGCCAACTAC
GTCGGCAGCA CCCCGAACTA CCTGGCCTAC ACCGGCCGCA GCTACGGCTA TGTCCACTCT
TCCGGCGCCA AGGCCGGCAA GTGGGGTTCG TACACCACGT ACAACCTGAG CATGAACTAC
CAGGCGCAGG ACGATCTGGT CCTGTCGCTG ATGGTCAACA ACGTGTTCAA CAAGCTGCCG
GAAGGCCAGC GCTACAACTA CCCGGGCAAC GAATCGACCC CGTTCAACGA CGGCTTCTAC
AGCGTCTACG GCCGCCAGAT CTCGGCCCAG GTCAAGTACA ACTTCTGA
|
|---|
| Protein sequence | MNYVSNTARR NTLAVALISA LMAAAPAMAQ DKATNLDKIT VTGSLIPQTQ VETQTPVMSI
TAEDIQTRGF SSVAEVLQQS SLTTGGLQGG QTSGSFTQGA EAAGMFGLNP GYTKYLINGR
PMLSYPALYN GSETFNNISG IPIDIVERIE VLPGGQSSLY GSDAIAGVVN IILKERMDGG
TMTVRGGTYT EGGGSNIRFS AAKGFNAFDD RFHALVNVQI ENGSPIWGYQ RDITKQTNPV
GYTAQVPSND FAVITNADNK LLMMDPTRCA NVAGLYDGTT VVGQRPSGES CGSVYSAGYK
TLKNGKNSGQ FYSSMTFDVN DNFQLFADVL YSKEKTEFTS GSSALWWGTK SVMGGFYDQG
LGKVVNLQRA FAPEEIGTGD YNNILNSDES RAYQVTLGGK GMVGDWDYSA SFTRGEYRLD
QNRFVRWKDK IEDFFGQTVL GPRLGTHTDP KDPTAQFGIY SPNYAAFYSP ITPDQFASFT
GYGTHRSKTW QNLGRVQVTN GSLFSLPGGD AGLAVVLEGG SEGWDYSPDQ AFVDGNVWGT
TAVAGAGHRS NYAVTSELRM PLHDKLTVSA SGRYDAFKIA DKTVDKATYS IGLEFRPIES
LLLRGKYGTA FRAPTLSDAF QGMSGSYASS QNDYYRCSQL GYGLRDEACS FYKGTSVYSE
KSGNPDLKPI TADVWSAGVV WAPVSNFSLS ADYYNWKIKN EVKTLSSDQL LLAEYQCRNG
LPNNTSASCG NVTDWVSRDA GGNLTRVYTP KLNVASQNLE AVTVAAKYQQ DIGRFGSLMF
SGNYTNMLKR EVQPMPGAAK LDLLSDPYNM WYYDNFAKVR GDLSVAWNIA KFTTTVYANY
VGSTPNYLAY TGRSYGYVHS SGAKAGKWGS YTTYNLSMNY QAQDDLVLSL MVNNVFNKLP
EGQRYNYPGN ESTPFNDGFY SVYGRQISAQ VKYNF
|
|---|
| |