Gene Smal_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2553 
Symbol 
ID6477043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2847420 
End bp2848856 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content65% 
IMG OID642731739 
Productbeta-lactamase 
Protein accessionYP_002028936 
Protein GI194366326 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCA CCCTTGCTGC CGCATTGCTC TGTTCCCTGG CCATCGCCCT ACCCGCCTCG 
GCGCGTGACG TCCCTATCGG CCTCTCTTCC CGGCTCGACA CCCAGCTGCA GGCCAACCGC
GAACGCTACG GCATCGCCGG CCAGGCGGTG CTGGTCGCGC ACAATGGCCA GGTGCTGTAC
CAGGGCGCCA GCGGCGAGCG CGATCCGGCC ACCCATGCAC CGGCCACCGT GAATTCCATC
TTCGCCGCGC AATCGATGGC CAAGCTGCTG ACCAGCACGC TGGTGATGCA ACTGGTGGAC
CAGGGCAAGG TGGATCTTGA CGCACCGGCC AACCGTTATG TTCCGGACCT TCCGGCTCCT
TGGCAGGCAA TCCACGTACG CGATTTCCTC AACCACAGCT CGGGTATCGG CGAGTACTAC
GACCGGGTGG ACAACCGCTG GGTGAGCAAG GGCTACCCCG GTGTGGCGCC CGACCTTGCA
GCTGCGCTGA AGGTGGCTGC GGCGGCGCCG ATGCAGTTCG CCACCGGCAG CCGCGTGCAG
TACACGCAGG CCAACTACCT GGTGCTGACC GCCTTGCTGG AAGCGCATTA CCGCAAGCCC
TACCCGGCCA TTGCGCGCGA ACGCATCCTG CAACCACTGA AGATGACCAG TACCTCATGG
GGCGTCACCA GCGTGCCAGC CACGCGCGCG GCGGTGCCTT ACATCGGCAA GGACGGCCAA
CTGCAGCCGG CCAATGAAGT TCCCTGGCCG GACTACGGTT GGGGCCACGC CGACCTGCAG
ACCACCGTGG GCGACATGAA TCGATTCCTG CAGGCGCTGG CGACCGGCAA GCTGCTGCGC
ACGGCGACCC TGGAAAAACT CTGGCAGCCG CAGAAACTGA GCGGTGGCGG CAGCAATTTC
TTCTCCACCG GTTGGGACAC AACCCGCAGC GACGGCTACA CCCAGGTCGG CCACGATGGC
GGTACCCGTG TACGTGCGCG GCTGGCCTAC AAGGGCTCGC TGGCCAGCGG TTACTGGGTG
TTCGTGTACC TGACCAACGG CAGCGCACGC AATGTCTGGT CGAGCACGCT GGTGGAGAGC
ACGATGGCGG TCGCCGCACC GGAGGAGTTT CCGCATGCGG TGTTGTCCGA GCGGCTGATC
GCGTATGCGC TGGATGACAG TGCCGATGCG ACACTGGTGA TGCGTAACTG GCTGCACGGC
AACAATGGGA TTCCCGCCGG CGAGCTGGAA CGTACGATCA ACGCCAGTGG CTATGCCATC
CGCGAGAGTC TGGGTGCCGG CAAGGCGCTG AAGGTGTTCA CGCTCAACAC CGAGCTGTAT
CCGGATTCGG CCAACGCGTG GGACAGCTTG GCCGAATGCC ATGCGGCACT GGGCGAGAAG
GAAACGGCCG ATCGGCTGTA TGCGAAGGCC AAGGCGCTGG CCAAGCCCTC GCGGTAA
 
Protein sequence
MYRTLAAALL CSLAIALPAS ARDVPIGLSS RLDTQLQANR ERYGIAGQAV LVAHNGQVLY 
QGASGERDPA THAPATVNSI FAAQSMAKLL TSTLVMQLVD QGKVDLDAPA NRYVPDLPAP
WQAIHVRDFL NHSSGIGEYY DRVDNRWVSK GYPGVAPDLA AALKVAAAAP MQFATGSRVQ
YTQANYLVLT ALLEAHYRKP YPAIARERIL QPLKMTSTSW GVTSVPATRA AVPYIGKDGQ
LQPANEVPWP DYGWGHADLQ TTVGDMNRFL QALATGKLLR TATLEKLWQP QKLSGGGSNF
FSTGWDTTRS DGYTQVGHDG GTRVRARLAY KGSLASGYWV FVYLTNGSAR NVWSSTLVES
TMAVAAPEEF PHAVLSERLI AYALDDSADA TLVMRNWLHG NNGIPAGELE RTINASGYAI
RESLGAGKAL KVFTLNTELY PDSANAWDSL AECHAALGEK ETADRLYAKA KALAKPSR