Gene Smal_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2547 
Symbol 
ID6477037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2839760 
End bp2840488 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID642731733 
Producttranscriptional regulator, histidine utilization repressor, GntR family 
Protein accessionYP_002028930 
Protein GI194366320 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.139406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGCCA GCAAGTCCGC CACGCTCAAC CAGCGTATCC GCAGCGATCT GGAAAGCCGC 
ATCCTCAGCG GAGAGTGGGC GCCGGGCTTT CGTATTCCGT ACGAGCACGA GCTGATGGAG
CAGTACGGCT GCTCGCGGAT GACGGTGAAC AAGGTGCTGA CCGCGCTGGC CGAGAGCGGC
ATGATCGAGC GCCGCCGCCG CGCCGGTTCG TTCGTGGCGC GGCAGCCGCC GCACCTGGAG
CAGGTGGCGC TTGAGATTCC GGATATCGCG ATGGAAGTCG GTTCGCGTGG CCACCAGTAC
GGCTACCACC TGCTGCAGCG CGAGCTGCGC CTGGCCGATG CCGGCAATGT TGGCGAAGTG
GAGCTGGCCG GCAGCGAACA GCTGCTGGCG ATGCGCTGCC TGCATCTGGC CGACGGCCGC
CCGCTGGCAC TGGAACATCG CCTGATCAGC CCGGTGGGCG TGCCCGAGGT GCTGGACGTC
GATTTCAACA CCACCGCACC GGGCAGCTGG CTGCTGCAGA ACGTGTCGTG GACCCGCGCC
CAGCACCGCA TCAGCGCCTG GGGCGCGGAT ACTGCCACTG CCAAGCTGCT CGATGTGAAG
CCCGGCACCG CCTGTCTGGT GATCGAGCGC CTGACCTGGC GCGGTGAGCA GCCCATTACC
CGCGTGCGCC AGGTGTTCCT GGGGGATGCC TGGGACCTGG TGGCGCGCTT CGCGCCTGGG
GCAAGGTAG
 
Protein sequence
MKASKSATLN QRIRSDLESR ILSGEWAPGF RIPYEHELME QYGCSRMTVN KVLTALAESG 
MIERRRRAGS FVARQPPHLE QVALEIPDIA MEVGSRGHQY GYHLLQRELR LADAGNVGEV
ELAGSEQLLA MRCLHLADGR PLALEHRLIS PVGVPEVLDV DFNTTAPGSW LLQNVSWTRA
QHRISAWGAD TATAKLLDVK PGTACLVIER LTWRGEQPIT RVRQVFLGDA WDLVARFAPG
AR