Gene Smal_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2478 
Symbol 
ID6476967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2778256 
End bp2781009 
Gene Length2754 bp 
Protein Length917 aa 
Translation table11 
GC content64% 
IMG OID642731664 
ProductUvrD/REP helicase 
Protein accessionYP_002028862 
Protein GI194366252 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGGC GCCCCTCGGG CTGGGGCCTG CGTGTGACCC GCTCGCCAGG CTGGCAGCTG 
TGGCTTGACG GCGAACATAT TGAACTTTTG ATTGAAGGCC GCCAGTACCG GCAACACGTA
GCTGACGACG AGCGCGTGCA GGTCATCCCT GGACTCTTCT GGGCCAAAGT CATCCTACAG
ACCCAGGGCG ACGGCGTGCT GACCATGAAT GGACTGCCCA ACGGCCAGGC CTCCCGGCTC
GCGGCAGCGC TGCAGCAGGT GCGCTTTGCG GGTACCACGC GCGGGCGCAA GGCACTGTTC
GACACGATTC TGGAGCAGAT CCAGTCGTGG CTGGCCGAAG CAGATGCCCT CATCGACCGG
GGCAGCACCG GCCGCCGCTG GATCACGCAC GAACAACAGC AGGCACTGCT GGCCGGTCGC
CCCGGCCTGC CGCTCCCGCA GCGCGAGCTG GAACAATTGT TCCTGGATGA GGATGTGCAC
GAGGACCTGC ATTCGCCCAG CCACCGTGTA GCACTGGACG CCCTGCACGA CTGGCAGCTG
GACTGGCCCA CGGCCTGGGC CGACGCCAAC GCAACCATGG CAGCGCGCGA ACGGGTACTG
GCCAAGGACT TCCTGGACCG CGTCGAGAGC AAGCCGCTGA CCGACGAACA GGCCCGCGCC
GTCATCTGCT TCGACAACCG CGTGCAGGTC GTCGCCTCCG CTGGCTCTGG CAAGACCTCC
ACCATGGTCG CCAAGGCCGC TTATGCCATC GATCGCGGCT TTGTCGAACC CGAACGGATC
GTGATGCTCG CCTTCAACAA GGATGCCGCC AGGGAGCTTG AAGAGCGCGC GCAGCGATGC
TTCGACCGGC TCGGCATGGG CGACACCGTG GTTGAAGCCC GGACCTTCCA CGCCCTCGGC
CTGGCCATCG TCGCCAAGGC CACCGGACGC AAGCCCGACA TCGCCGAATG GACCACCGAC
GCCACGCTGG GCTTCAACAA GCTGGCCGAA CTGGTGGACG ACCTGAAGGA TCGCTCGACC
CACTTCCGTA CCCAATGGGA CATGTTCCGC TTGGTGTTCG GGCGCGACCT GCCGCCATTC
GGCACGGAAA TGGAGGCCGA TGGCTACGAC CGCGATGGCA CGCCCTACAT CCGTACCCTG
CAGGGGGAAC GGGTGAAGAG CCTGGAAGAG TGCGTCATCG CCGACTGGCT CTTCTACAAC
GGCGTGACGT ACGACTACGA GCGACGCTAC GAGTTCGACA CCGCGACAGA CACCCATCGC
CAGTATCGTC CGGACTTCTA CTATCCGGAC GCCCAGCTGT ATCACGAGCA CTTTGCGCTG
GATGCCGATG GCCAGCCGCC GAAGCACTTT GCCAACTACA GCGAAGGGAT GCACTGGAAG
CGCCAGCAGC ATGTGGCGCG CGGCACGGCC CTTGTCGAGA CGACATCCTT TGGCCTGCGC
AGCGGGCATG CCCTGCTGGA CCTCGCAGAG AAGCTTGGCG AGTGTGACAT CGAGCTCGAC
CCGAATCCGG ACCGCGAGCT GCCCGATCAG GGTGCCAAGC CGATGCCCGA TGCGGACCTG
ATCGGCTTGA TGCGCACCTT CATTGCCCAT GCCAAGAGCA ACTGTCTGAC GCTGGATGAC
ATGGCCGCGC GCCTGCGGCA GATGCCCGAA GACCAGTTCA AGGAGCGGCA CCGTCGCTTC
CTGGAAATCG CCGGGCCGGT CTTCCAGGCC TGGGACAACG CGCTGGCTGA CGAGCGTGGC
ATCGACTTCG AAGACATGCT CAATATGGCC GCTGGACTGC TGGAACAGGG CCGCTACGAA
TCGCCTTACG ATCTGGTGAT GGCCGATGAA TTCCAGGACG CTTCGCGCGC CCGCGCACGC
CTCTGCCGTG CATTGGTCAG CCAACCGGGC CGCCATCTGT TCGCGGTGGG CGATGACTGG
CAGTCGATCA ATCGCTTCGC CGGTGCCGAC GTTTCGGTGA TGACCGGATT CCGCGAGTGG
ATGGGCCATG GCCAGGTGCT GAAACTGGAA CAGACGTTCC GCTGCCCACA GGCGCTCTGC
GATGTGTCCG GCCGCTTCAT CAGCCGCAAT CCCGCGCAGA TCACCAAGGA AGTTCGCTCT
GCCGCACCGG CCATGGGCCC GGTGCTGCAG GCCTTCCAGA TGAACCGGCG GGAGGAGGTG
CAGGATGGCG TTCGCCAGTA CCTCGCCAAG CTGCATCAGC AGCTGCTGTC CGGTGCCGTT
CCACAGGGCC GCAACGGGCG CGTGACGGTC TTCATCCTGG GGCGCTACCG CGCCGATCGC
AGCGCGATGC CTTCGGATTG GAAGACAGCC TTCGGCAGCA CGATGGAGGT CGAGTTCCTG
ACCGCACATC GATCGAAAGG ACGCGAAGCG GACTACGTAA TCCTGCCGGG CATGATCAAC
CGCAGCTTTC CGAGCCTGCG CGCGGATGAC CCGGCGCTTT CGCTGGCGAT GCCGGATGGG
GATACCTATC CGCTGAGCGA AGAACGGCGG TTGTTCTATG TCGCGCTGAC GCGTGCGCGA
CGTTCGGTGT CCATGTTCAC CCTGCAGGGG AAGCGTTCGC CGTTCCTGGA TGAACTGGTG
AAGGACGGGG CTGTGAAAGT AACCGCAATT TCAGGCGCGG CCATCAATGA AGAACGCTGC
CCAGTGTGCA AGGTGGGCGT GTTTGTGGAC CGCAATGGGC CGCATGGGAC GTTCCGGTCG
TGCTCCAGTT ACCCGTTGTG CCACAACAAG CCGAAGGGTG AGCGACGCAG GTAA
 
Protein sequence
MEWRPSGWGL RVTRSPGWQL WLDGEHIELL IEGRQYRQHV ADDERVQVIP GLFWAKVILQ 
TQGDGVLTMN GLPNGQASRL AAALQQVRFA GTTRGRKALF DTILEQIQSW LAEADALIDR
GSTGRRWITH EQQQALLAGR PGLPLPQREL EQLFLDEDVH EDLHSPSHRV ALDALHDWQL
DWPTAWADAN ATMAARERVL AKDFLDRVES KPLTDEQARA VICFDNRVQV VASAGSGKTS
TMVAKAAYAI DRGFVEPERI VMLAFNKDAA RELEERAQRC FDRLGMGDTV VEARTFHALG
LAIVAKATGR KPDIAEWTTD ATLGFNKLAE LVDDLKDRST HFRTQWDMFR LVFGRDLPPF
GTEMEADGYD RDGTPYIRTL QGERVKSLEE CVIADWLFYN GVTYDYERRY EFDTATDTHR
QYRPDFYYPD AQLYHEHFAL DADGQPPKHF ANYSEGMHWK RQQHVARGTA LVETTSFGLR
SGHALLDLAE KLGECDIELD PNPDRELPDQ GAKPMPDADL IGLMRTFIAH AKSNCLTLDD
MAARLRQMPE DQFKERHRRF LEIAGPVFQA WDNALADERG IDFEDMLNMA AGLLEQGRYE
SPYDLVMADE FQDASRARAR LCRALVSQPG RHLFAVGDDW QSINRFAGAD VSVMTGFREW
MGHGQVLKLE QTFRCPQALC DVSGRFISRN PAQITKEVRS AAPAMGPVLQ AFQMNRREEV
QDGVRQYLAK LHQQLLSGAV PQGRNGRVTV FILGRYRADR SAMPSDWKTA FGSTMEVEFL
TAHRSKGREA DYVILPGMIN RSFPSLRADD PALSLAMPDG DTYPLSEERR LFYVALTRAR
RSVSMFTLQG KRSPFLDELV KDGAVKVTAI SGAAINEERC PVCKVGVFVD RNGPHGTFRS
CSSYPLCHNK PKGERRR