Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2373 |
Symbol | |
ID | 6476856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2670454 |
End bp | 2671158 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642731554 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002028759 |
Protein GI | 194366149 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0015649 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.589788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGGA TCTACAATTC CTCCATGTCC TCTCCCGCCC TGCCCTGGAA TGGCACGCTG CTGCTGGATG CTCACGTGGC CGTGCTGCAG GGCCACGCCG GTGGCAGCGA TACGCACGCG CACTACGCCC ATCAACTGTT GCTGAGCGAC GGCGCGCCCT GGCAGGTCGA GGTCGCTAGC GTACGGCAGC AGGGCCAACG GCTGTGGCTG CCGTCATTCC AGCCGCACGC AATCCTGTCG GCGCCGGAAG CGGGCTGTAC GGTGTTCCTC GAGCCCGCGC ATGCCGATCC CGGGCAGATC CAGCAGCACC TGCACGCGCT GCCGGGCAAC GCGCTGGAGC TGCACGACTG GTTACCACGG TTGAGCCGCC CGCAGCCGCT GGACCGCCGC GTGCAGGCGG CGCTGTCCCG TATCGCCCAG CACCTGCCCG GCCCGGTGCC GGCTGCAGAT ATCGCCGAGG CGGCGCATCT GTCGACCAGC CAGCTGCATC GGCGTTTCCA GTCCGATCTG GCGGTAACCC TGCGCGGCTG GGTGCTGTGG CAACGGCTGC GCCGCGCACT GATGCATCAT CTGCGCGGGC ACAGCCTGAC CGACAGCGCG CACGCGGCCG GATTCGCTGA CCTGGCCCAT CTGTCACGCA GCCTGCGCCG CATGTTCGGC ATCGGTGCCG CGCAGCTGCA GGGCCTGCAG CTGCACGCGG CCTGA
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Protein sequence | MAWIYNSSMS SPALPWNGTL LLDAHVAVLQ GHAGGSDTHA HYAHQLLLSD GAPWQVEVAS VRQQGQRLWL PSFQPHAILS APEAGCTVFL EPAHADPGQI QQHLHALPGN ALELHDWLPR LSRPQPLDRR VQAALSRIAQ HLPGPVPAAD IAEAAHLSTS QLHRRFQSDL AVTLRGWVLW QRLRRALMHH LRGHSLTDSA HAAGFADLAH LSRSLRRMFG IGAAQLQGLQ LHAA
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