| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2320 |
|---|
| Symbol | |
|---|
| ID | 6476803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2609087 |
|---|
| End bp | 2610124 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642731501 |
|---|
| Product | Flp pilus assembly protein CpaB |
|---|
| Protein accession | YP_002028706 |
|---|
| Protein GI | 194366096 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3745] Flp pilus assembly protein CpaB |
|---|
| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.249222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGT TGACCCGCAT CGCCGCCGTT GCCCTGATCG GGCTGGCCGT GCTGCTGGCC
CTGGTCGCCT TCATGATCGG GCGTAAGCCG AACGCACCGG CCACAGTGGC TCCGGTCGCG
CAGAGCGAGG CCCAGGCGAT CACGGTGGTG GAATCGGTAG CGCGCCTGCC GGCCGGCGAA
CCAATCACCG CCAACGGGCT GCGCCTGGCG CAGCGCACCG CGCCGGTCGC CGGTGCCGCC
ACCAGCATCG CTTCCGTCGT CGGCAAGGTG CCGGTGCAGG ATATCGCCGA AGGCACCGCC
ATCAGCAGCA GCGCACTGGC GCAGGGATTC TCGCTGCAGC TGCGCCCGGG CGAGCGCGCC
CTTGCGGTGC CGGTCGATGA ACTGGTCGGC GCTGGCAACC GCATCCTGCC CGGCGACTTC
GTCGACGTCT TCCTCAACCT GCGCAACGCC CAGCCCAACG CCAGCGGCCC GGGCGAGGCT
GCACAGACGC GCCTGCTGCT GTCCCGCCTG CGCGTGCTCA GCTATGGCCA GCAGGATATC
GCCCCGGCTA CCAGCGACGC TGTTGCCAGC AACGAAGGCG ACAACCGCAA CGACCCGCGT
GCCGCCGACA TCACCGGAAG CGGCAGCAGC CACACCACGA GCAGCGAAAC CACCCAACCG
GCACGCAGTG CGGTGCTGGC GGTCCCGGTG GCCGATGCCA ATCGCCTGCT GCTGGGGGCG
CAGCAGGGCA AGCTGTTCCT GGCCCTGCGC AATCCGGCTG ATACCGGCCT GCCCGACCTC
GCCCTGTTCC CGCAGTCACG CGGGGTGATC GATCCGTTGC GCGGCCTGGA TGCGGAACAG
CAGCTTGCCC TGCAGCGACC GGAGAACCAT GCCTTCGCCG GTATCGACGA CGATGCGCTG
GCTGGCCGCG GGACCTCCCC GGCACGTGCC AACCCGCAGA CGCCGGCACG TGTACCTGCG
GTGCGTCACA GTGCGCCGCG CGCCCCTGGC ATCGAAATCA TCCGCGGGGA CAGCTCTGCT
CCCCGTGGTT CCCTTTGA
|
|---|
| Protein sequence | MLKLTRIAAV ALIGLAVLLA LVAFMIGRKP NAPATVAPVA QSEAQAITVV ESVARLPAGE
PITANGLRLA QRTAPVAGAA TSIASVVGKV PVQDIAEGTA ISSSALAQGF SLQLRPGERA
LAVPVDELVG AGNRILPGDF VDVFLNLRNA QPNASGPGEA AQTRLLLSRL RVLSYGQQDI
APATSDAVAS NEGDNRNDPR AADITGSGSS HTTSSETTQP ARSAVLAVPV ADANRLLLGA
QQGKLFLALR NPADTGLPDL ALFPQSRGVI DPLRGLDAEQ QLALQRPENH AFAGIDDDAL
AGRGTSPARA NPQTPARVPA VRHSAPRAPG IEIIRGDSSA PRGSL
|
|---|
| |