Gene Smal_2277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2277 
Symbol 
ID6476690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2556887 
End bp2558083 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content69% 
IMG OID642731458 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002028663 
Protein GI194366053 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAC GTCCCGTCGT TCCCGGCTTG CCGGCGCTGG TGTTGGCTGC CCTGATCGGC 
ACCATGGCGA TGATGTCCTT CGTCGCCGTG ATCGGCCCGG TGGTCCGCAT GCTCGGTTTG
TCCGAGTGGC ATGCCGGCCT CTCGGTCACC GCCGCCGGTG TGTTGTGGAT GCTGGCCGCG
CGCCCGTGGG GCCAGCTCAG CGACCGCATC GGCCGCAAGC GCGTGCTGAT GCTGGCGATG
AGTGCCTACA CCGTGGTCTA CATCGCGCTG GCGGTGTTCA TCGACGTGGC CCTGCAGGCG
GTGCCGCCTG TATTGGTATC GGTGCTGGTG CTGGTCGGTG CGCGTGGCCT GATCGGCCTG
TTCTACGCCG CGGTGCCTCC TACCGCTGCC GCGCTGATCG CCGACAAGGC ACCGACCGGG
CAGCGTGCGA AATTCCTCGC CCGCCTGGGC AGCGCCAACG CACTGGGCAT GGTGCTTGGC
CCGGCCGCCG CTGGCTGGCT GGCCTATACG AATCTGTCGC TGGCGCTGTA TGTGGCCGCA
TTGTTGCCGC TGCTTGCGCT GGCATTGCTG GCGTGGCGGT TGCCGGCCAC ACCGCCGGTG
GAGAGCGCTT CTGCGCAACG CCGCCAGCCG ATGAGCCGTC TCGACCCGCG CCTGCGCCTG
CCTCAGCTGG CGGCGTTCAT CGCCATGATC TCGGTGACCA TCGCGCAGGT GACGGTCGGC
TTCTTCGCGA TTGATCGCCT TGGCCTGGAT GCCGCTGCGG GCGCGCGCAT GGCCGGCATT
GCACTCACAG CGGTTGGCGT CGGCCTCATC CTGGCACAGG CGCTGGTGAT GAAGATGGAG
GTACATCCAC GCCGCTGGAT CGTCCTCGGC GCACTCATTT CCGGCATCGG CTTCGCTTCG
GTGGCTGGCG TGCAGCAGGC CTGGCAGTTG CCGACGGCGT ACGCGCTGGC CGCGTTCGGC
ATGGGTTTCG TATTCCCCTC GTTCCAGGCG CTGGCCGCCG ATGCGGTGGA GGCGCACGAG
CAGGGCGCCG CGGCCGGCAC GGTGGCGGCC GCGCAGGGGC TGGGCATGGT GGCCGGGCCG
ATGCTCGGCA CGTTGTTGTA TCGCGGTGGG CCCAGCCTGC CTTACCTGCT GGTGGGCGCG
CTGCTGCTGT TGCTGTGCGC GCTGGCCGCC GCGTATCGGA TGAAGGAGAC CTCATGA
 
Protein sequence
MHARPVVPGL PALVLAALIG TMAMMSFVAV IGPVVRMLGL SEWHAGLSVT AAGVLWMLAA 
RPWGQLSDRI GRKRVLMLAM SAYTVVYIAL AVFIDVALQA VPPVLVSVLV LVGARGLIGL
FYAAVPPTAA ALIADKAPTG QRAKFLARLG SANALGMVLG PAAAGWLAYT NLSLALYVAA
LLPLLALALL AWRLPATPPV ESASAQRRQP MSRLDPRLRL PQLAAFIAMI SVTIAQVTVG
FFAIDRLGLD AAAGARMAGI ALTAVGVGLI LAQALVMKME VHPRRWIVLG ALISGIGFAS
VAGVQQAWQL PTAYALAAFG MGFVFPSFQA LAADAVEAHE QGAAAGTVAA AQGLGMVAGP
MLGTLLYRGG PSLPYLLVGA LLLLLCALAA AYRMKETS