Gene Smal_2224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2224 
Symbol 
ID6476555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2499012 
End bp2499440 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID642731406 
Productputative PAS/PAC sensor protein 
Protein accessionYP_002028611 
Protein GI194366001 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.243121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTACA CCCCCGACAA CGCCCAGCTG CTGAATGCCA TGCAGAACGT CATGGTGATC 
TCCACCACCG ACCTGCAGGG CAACATCACC TACGCCAATG ACCTGTTCTG CACGCTCACC
GGGTTCGCGC GCGAGGAGCT GATCGGCCAG CCGCACAGCA TCGTGCGCCA TCCGGATGTG
CCCAAGGCGG TCTACAAGGA CATGTGGGAC ACCATCAAGG CCGGCAAGAC CTGGACCGGC
ATCGTGCCCA ACCTTGGCAA GGGCGGCGTG CTCTACGTGG TCGACACCAC CGTGCAGCCG
CTGTTCGACG CCGACGGCAG CATCACCTCG TACATCAGCA TCCGCCGCGT GGTGAACGAC
CTGATGCAGA ACTACGACCT GGTCGAGTTC AGCAAGGAAA AGTTCGACGA CTTCTACGAG
GCCGCGTGA
 
Protein sequence
MSYTPDNAQL LNAMQNVMVI STTDLQGNIT YANDLFCTLT GFAREELIGQ PHSIVRHPDV 
PKAVYKDMWD TIKAGKTWTG IVPNLGKGGV LYVVDTTVQP LFDADGSITS YISIRRVVND
LMQNYDLVEF SKEKFDDFYE AA