| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2204 |
|---|
| Symbol | |
|---|
| ID | 6476535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2468273 |
|---|
| End bp | 2468623 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731386 |
|---|
| Product | general secretion pathway protein I |
|---|
| Protein accession | YP_002028591 |
|---|
| Protein GI | 194365981 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0202192 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGGAT TCACCTTGAT CGAAGTGCTG ATCGCACTGG CGATCGTTTC GATTGCGCTG
GCGGCGGTGA TGCGCTCGGT GGCGGTGGCC ACCGACGATC AGTCACGACT GCGTGATCGC
CGCCTGGCAC TGATGTGCGC GCAGGACCGC TGGCAGGAGC TTCGTTTGGC CGGGCAGGCA
CCCCAGGATG CGCGGCAACG CTGCGTGCAG GGACGCGGAA CCTTCCTGGT GCTGCAGCAC
CTGGGCACGG GCAGCGACGG CCAGCCGCAG CTGGAACTGA GCGTGGTCGC CGAGGATGCA
CCGCGGCAGT CGCTGGCGCG GATGCAGCTG CCGTGGACGG CCGCGCCATG A
|
|---|
| Protein sequence | MHGFTLIEVL IALAIVSIAL AAVMRSVAVA TDDQSRLRDR RLALMCAQDR WQELRLAGQA
PQDARQRCVQ GRGTFLVLQH LGTGSDGQPQ LELSVVAEDA PRQSLARMQL PWTAAP
|
|---|
| |