Gene Smal_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2197 
Symbol 
ID6476528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2462053 
End bp2462754 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content71% 
IMG OID642731379 
Producthypothetical protein 
Protein accessionYP_002028584 
Protein GI194365974 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCC ATCAACCCCC TCGGCCAGAG CCCGGCATGC GCGGTCGCCA GTTGCTGGTG 
ACCGTCGTGC TGGTGCTGGC CGCCGTGCTG GTACTCGGCA TCGCGGTGTG GTGGCTGCTG
TTCAAGGACA CCGCCAGCAC CCGTCGGCCG GTGGTGCAGC CGCCGATGCT GGCACTGCCA
CCGCCGCCTC CGCCGCCACC CCCGCCGCCG GAAAAGCCGC CAGAGCCGGA AACGCCGCCG
GAAGAGACGA TGCCCGAGCC GGAGCCGCTG GATCAGCCGA CGCCCGCTGA AGAGCCGACG
CCGACCCCGG ACAATGCCGA TCCGGTGACG ATGAATGCCG ATGCGCAGGC TGGCGGTGAC
AACTTCGGCA TCCAGTCCGG CAGTGGCGGC GGTTCGTCCG GCGTCGGCCG TGGCGGCGCC
GGCAATGCCA CCTACGGTCG CTATCTCGGC TACCTGATGC AGCAGGCGAT CTCGCGTGAC
GACAAGGTCA AGCGCCTCGC GTTCCAGCTG CAGGTGAACG TCTGGCTGGC CACGGATGGT
CGGCTGGAGA AAGTCGAGCT GGTGCGTGGC AGTGGCAACG AGGAGGCCGA CGCGGCCGTG
CTCGACGCGC TGCGACGCAT CGGCAAGGTC GACCAGGCAC CGCCGCCGTC ACTCGATTTC
CCCGCCCGCG TCCTGATCCA GGGCCGCCGG CCCGGGGCCT GA
 
Protein sequence
MTAHQPPRPE PGMRGRQLLV TVVLVLAAVL VLGIAVWWLL FKDTASTRRP VVQPPMLALP 
PPPPPPPPPP EKPPEPETPP EETMPEPEPL DQPTPAEEPT PTPDNADPVT MNADAQAGGD
NFGIQSGSGG GSSGVGRGGA GNATYGRYLG YLMQQAISRD DKVKRLAFQL QVNVWLATDG
RLEKVELVRG SGNEEADAAV LDALRRIGKV DQAPPPSLDF PARVLIQGRR PGA