Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2158 |
Symbol | |
ID | 6476489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2419297 |
End bp | 2419977 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731340 |
Product | ABC transporter related |
Protein accession | YP_002028545 |
Protein GI | 194365935 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.605751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCCC TGGAGGATGT GCAGTTCGGC TACGCAACAC GCCTGGTGCT GGATATCCCG CAGCTGCTGA TAGAGCAGGG CAGCAGCGTG CTGTTGCGTG GAGTGAGCGG TGGCGGCAAG AGCACCTTGC TCGGCCTGCT GGCCGGCGTC CTGCTACCCG GCAGGGGGCG CGTCGAAGTG GCGGGTCACG CGCTGCAGAT GATGCGGGGT GCCGCGCGCG ATCGCTTCCG TGCCGATCAC CTGGGCGTGA TCTTCCAGCA GTTCAACCTG CTGCCGTTCC TCAGCGTGCG CGACAACATC GCGCTTGGCC TGCGCTTTTC TCCGGTGCGC AGTGAGCGCA TCAGCGGGCC GCTGGACGAC GAGATCCTGC GCCTGCTGGA AGCGCTGCAG CTGGACCCGG CGCTGTCCAA GCGTGCGGCC GGTACCCTGA GTGTCGGCCA GCAACAACGC GTGGCCGCCG CACGCGCCCT GATCGGCCGC CCCGCAGTAC TGCTGGCTGA CGAGCCGACC TCGGCGCTGG ATCGCCAAGC CGCGACCGCC TTCCTGCAGC TGATGTCCGC ACAGTGCCGG GCCGCCGGTA CCACGGTTCT GGTGGTCAGC CACGATGAAA GCCTGCAGCC CTTGTTCGAC CGCACCATCG CGTTGTCGCA GATCAATCAC GCAGGTGGCA CCCATGCTTG A
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Protein sequence | MIALEDVQFG YATRLVLDIP QLLIEQGSSV LLRGVSGGGK STLLGLLAGV LLPGRGRVEV AGHALQMMRG AARDRFRADH LGVIFQQFNL LPFLSVRDNI ALGLRFSPVR SERISGPLDD EILRLLEALQ LDPALSKRAA GTLSVGQQQR VAAARALIGR PAVLLADEPT SALDRQAATA FLQLMSAQCR AAGTTVLVVS HDESLQPLFD RTIALSQINH AGGTHA
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