Gene Smal_2158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2158 
Symbol 
ID6476489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2419297 
End bp2419977 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID642731340 
ProductABC transporter related 
Protein accessionYP_002028545 
Protein GI194365935 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.605751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCCC TGGAGGATGT GCAGTTCGGC TACGCAACAC GCCTGGTGCT GGATATCCCG 
CAGCTGCTGA TAGAGCAGGG CAGCAGCGTG CTGTTGCGTG GAGTGAGCGG TGGCGGCAAG
AGCACCTTGC TCGGCCTGCT GGCCGGCGTC CTGCTACCCG GCAGGGGGCG CGTCGAAGTG
GCGGGTCACG CGCTGCAGAT GATGCGGGGT GCCGCGCGCG ATCGCTTCCG TGCCGATCAC
CTGGGCGTGA TCTTCCAGCA GTTCAACCTG CTGCCGTTCC TCAGCGTGCG CGACAACATC
GCGCTTGGCC TGCGCTTTTC TCCGGTGCGC AGTGAGCGCA TCAGCGGGCC GCTGGACGAC
GAGATCCTGC GCCTGCTGGA AGCGCTGCAG CTGGACCCGG CGCTGTCCAA GCGTGCGGCC
GGTACCCTGA GTGTCGGCCA GCAACAACGC GTGGCCGCCG CACGCGCCCT GATCGGCCGC
CCCGCAGTAC TGCTGGCTGA CGAGCCGACC TCGGCGCTGG ATCGCCAAGC CGCGACCGCC
TTCCTGCAGC TGATGTCCGC ACAGTGCCGG GCCGCCGGTA CCACGGTTCT GGTGGTCAGC
CACGATGAAA GCCTGCAGCC CTTGTTCGAC CGCACCATCG CGTTGTCGCA GATCAATCAC
GCAGGTGGCA CCCATGCTTG A
 
Protein sequence
MIALEDVQFG YATRLVLDIP QLLIEQGSSV LLRGVSGGGK STLLGLLAGV LLPGRGRVEV 
AGHALQMMRG AARDRFRADH LGVIFQQFNL LPFLSVRDNI ALGLRFSPVR SERISGPLDD
EILRLLEALQ LDPALSKRAA GTLSVGQQQR VAAARALIGR PAVLLADEPT SALDRQAATA
FLQLMSAQCR AAGTTVLVVS HDESLQPLFD RTIALSQINH AGGTHA