| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2114 |
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| Symbol | |
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| ID | 6476374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 2369287 |
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| End bp | 2370996 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642731296 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002028501 |
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| Protein GI | 194365891 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.955657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAG CCGAACGACT GCTTGAACTC GACCGCCTGC ACCTGCTCGA CACGCCACCA
GAGCCTGTTT TCGATGCGAT CGTCGCCGCC GCGCGTGCCG CTACCGGCAT GACCATGGCT
CTGATTTCAG TTGTTGCCGA CGAGCGCCAG TGGTTCAAGG CCAACATCGG GCTGGAAGGT
GTCAGCGAAA CCGCGCGCGA GATTTCATTC TGCACCCATG CCATACAGCA GGACACGCTG
TTCGAGATTC CGGACGCGCG CCAGGACCCT CGCTTCTCCA CCAATCCCCT GGTGACCGGC
GGCCCGCGCA TCCGTCACTA CGCGGGAATC TCGCTGGGCT CGGCGCACGG CGCGCGCATA
GGAACACTGT GCCTGCTCGA CCCGATGCCC GGTGTGCTGT CGCCTTCGCA ACGCGAACTG
ATGGTGCATC TGGCCCGGGT CACCACCCAG GTGCTTGAAC AGCGCAGCAC CTTGATGGCA
CAGGTCGGCC AGGCCAAGGC CCTGCATCGT GAGCTGAAGC GCAGCGAGGA CTTCCTGGAG
CGCACCAACC GCGCGGCCCG GGTGGGTGGC TGGGAAATGG ACCTGGTCAG CAACGAGGTC
CGCTGGACCC GCGAAACCAA GCAGATCCAC GGCGTGCGCA GCAACTTTGA ACCGACGCTC
GAAACTGCGC TCTCGTTCTA TCGCGAGGAC AGCCGAAACA TCATCCGCAC GGCGGTGCAG
CGTTGCATCG ATGAAGGCAC GTCGTGGGAG GTGCAGCTGC CGATGACCAC CGCCGACGGA
CGAGCCATCT GGACCCGCGT GGTTGGAGGC CGGCAGCAGG TCGATGGCCG GCCGCGGCTG
GTCGGGGCCA TACAGGACAT CACCGAGGAG CGCGCCGCGC TGGATGCACT GGAAGCCAGC
GAAACCCGCT ACCGGCGGCT GTTCCACTAC AGCCTTGGCC TGATCTGCAC CCACACGCTG
GAGGGCGTGC TGACCTCGGT GAACCCAGCG GCCGTGCAGT CACTGGGCTT CGATGAGAGC
TACATGATCG GGCGCAGCTT GTGCGACCTG ATGCCGCCGG AGAAGCGGGC CGCGTTCAAG
GCGTATCTGG AACGCATCGC AGTCAACCAC ACCGATGCCG GCGTCATCGA GCTGATCGCC
GCCGATGGTA CCCGGCATTT CTGGGCGTAT CACAACGTGC TCGACAACGA GGCCACCCAA
CCCTACGTGC TCGGCCATGC GCAGGACGTC ACCGCACTGC GGATGCAGGA ACAGCAGTTG
CGCGAGATGT CCTTCAAGGA TCCCCTCACC CAGAGCTACA ACCGCCGCTT CCTGCCCCGC
CTGGACGAAC TGATCGACCA GCCTTGGGCT TGCCTGATGT TCGATCTGGA TCATTTCAAG
CAGATCAACG ACACCCAGGG CCATGCACGG GGTGACACGG TGCTGGTCGA GTTCGCCGCC
TTCCTGCGCG CTCCACTGGG GTCAATGGAA AGCGTAGTGC GTATGGGTGG CGACGAGTTC
ATGGTGGTGC TGACTGCACC GGAACCGGGA CGGCTGGCCA CGCTGGAGCA GTGGTATGCG
CAGCATGCCG GGCAGTCACC CACACCCTTC TCGCTGGGCG CGACCCACCA CGCACCCGGC
GAGACGGTGG CCGACACCCT GCAGCGCGCC GACAGCCGTC TGTATCGCGA GCGTGCACGC
GTGCGCACGC ATCCGCGCCC CTCATCCTGA
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| Protein sequence | MDEAERLLEL DRLHLLDTPP EPVFDAIVAA ARAATGMTMA LISVVADERQ WFKANIGLEG
VSETAREISF CTHAIQQDTL FEIPDARQDP RFSTNPLVTG GPRIRHYAGI SLGSAHGARI
GTLCLLDPMP GVLSPSQREL MVHLARVTTQ VLEQRSTLMA QVGQAKALHR ELKRSEDFLE
RTNRAARVGG WEMDLVSNEV RWTRETKQIH GVRSNFEPTL ETALSFYRED SRNIIRTAVQ
RCIDEGTSWE VQLPMTTADG RAIWTRVVGG RQQVDGRPRL VGAIQDITEE RAALDALEAS
ETRYRRLFHY SLGLICTHTL EGVLTSVNPA AVQSLGFDES YMIGRSLCDL MPPEKRAAFK
AYLERIAVNH TDAGVIELIA ADGTRHFWAY HNVLDNEATQ PYVLGHAQDV TALRMQEQQL
REMSFKDPLT QSYNRRFLPR LDELIDQPWA CLMFDLDHFK QINDTQGHAR GDTVLVEFAA
FLRAPLGSME SVVRMGGDEF MVVLTAPEPG RLATLEQWYA QHAGQSPTPF SLGATHHAPG
ETVADTLQRA DSRLYRERAR VRTHPRPSS
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