| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2065 |
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| Symbol | |
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| ID | 6476243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2316733 |
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| End bp | 2319624 |
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| Gene Length | 2892 bp |
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| Protein Length | 963 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642731247 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002028452 |
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| Protein GI | 194365842 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGAC CCGCCGGAGC AGTGCACAGC ATCTCGTTGT CCCCCACACC CCTGATCGTG
GCGCTGCTCG CCGTGCTGGC GGGCCTGCCC ACGGCCCAGG CGCAATCCAG CAAGGACGCG
GCAGGGCAGG ATCCCACCAC GCTGGACCAG GTGCAGGTCA CCGGCATCCG CGAGTCCATG
CAGAGTTCGA TCAACAAGAA GCGCGACGAT ACGGTCATTG CCGATGTGCT CTCCGCCGAC
GACATCGGCG ACCTGCCGGC GCCGTCGCTG GCCGATGCCA TCGAGACCCT GACCGGTGCC
GCCTCGACCC GCGACAAGAC CGGTGCCTCG GAAATCTCGA TCCGTGGCCT GGGCGCCTTC
CTCAGCAGCA CCAATTTCAA CGGCCGCGAG ATCACCAACG GCAGTGGCGA CCGCTCGGTG
AACTTCAATA TGTTCCCGGC TGAGCTGATC AACACCGTGG CCATCTACAA GAGCCAGCGC
GCCGACATCA TCGAAGGTGG CGTGGCTGGC ACCATCGGCC TGGAAACGGT ACGTCCATTG
GAGTACGGCA AGCGCTCGGC GCAGATCGAT ATGCGTGGCA GCTGGGCCGA GTATGACAAG
AAGTACCGCG ACGACGACGG CATCGGCTAC CGTGGCACCG CCAGCTACAT CGACCAGTTC
GAGTTCGGCA ACGGGCAGAA GCTGGGCATA TCGCTGGGCT TCCAGCGCCT GGAAGGTACC
GATCCGGAAG AAAGCATCAC CAGCGGTTCC ACCTGGTATG CCTGCGATGG CACGCAGAAC
GTGGCCAATG CCAACTGTGG CGAAGTCAGT GCACAGGCCA TCGCCAACGG TGCGCCGTAT
TACCTGGTGC CGAGCAGCCG CATCTACCGC CTCAAGCAGG AGCGCAACGA TCGGCAGAGC
GAGTTCGCCG CACTGCAGTG GCGGCCCAAT GACGTGGTCG AATTGAATGT CGACTTTGAG
CACACCCAGC GCAACTGGTA CGAGAACCGC AGTGACCTGA GCCTGTCCAA TGCGCGCCGC
GGCATTACCC AGCGCGAGGT GGACGACGAG GGTATCGTGC GCCACCTGCA TGGCAGCACT
TCGATCGATT CCACCTCCAA CCGCTATTGG CGCGGTGAGG AATACACCGG TGGTGGCCTG
AATCTGATCC TGCGGCCAAG CGCGGCGTGG GAACTGTCCA CCGATCTTTC CTACTCGCAC
ACCAATCGTC TCGACAGCGA GCGCATGACC CGGCTGCGCG CCAACCAGCG CGACGTCAAC
AATGCCATCG TTCCCGGCAT CAGCAGTGGC GCCACCGGGT ACGTGGACTA CGACTGGGAC
TGGCATGGCG AAGTGCCCAG TGTTGCCCTG GCGCCGAACT TCGACCCCAA CAACTGGGAC
GCCTACACCG GCGCGGCGCG CGTCACCTCC AGCGCAACGG AGAACGACCA CAGGATCAAG
GCCGGCCGCT TCGATGCCAG CTTCATGCCG GAGTCCGGTT TCTTCACCCG CATCAAAGGC
GGCGTGCGCG CCAGCCAGGC CGACTACCGC CTGCGCGACA ACACCCTGGT AACCGACTAC
GACCAGCGCG TGGCGGCCGA CAAAGCGAAG ATCATCGCCG CCAACCAGGC CTGCCGCGCG
CCGTTCCCGC AGGATGACTT CATGGATGCG GCCAGCGGCA ACACGATTTC GTCCTGGGCG
TACTTCGATC CGAACTGCCT GTACCAGTCG TTCCGTGGCA GCCTGGACAG CGGCCTCGAT
CCGGGCTTCC AGGATCCGAA CAATGTCGAT ATCACCGAGA AGACCCGCGC GCTCTACCTG
ATGGGCGAGT TCAGCAGCAC GCTGTTTGGG CTGCCGGTGA CCGGCAACCT TGGCCTGCGC
TGGGTGAAGA CCGATGTGCG TTCCGAAGGG GTGCGTACCG GCCTGCGCAT TGAAGACAAC
GGAGACGGTA CGATCCGTCT GCAGCCCACC GGCGACTACA GCACCCAGGT GTTCAAGGCG
GGCAACGACA AGCTGCTGCC CAGCCTGAAC GCGGCTTTCG AACTGCGGCC GGACCTGTTG
CTGCGGGTCG GCGCCTACCG CGCGATGTCA CGGCCGGATA TCGCCGCGCT GGGCGCAGGG
CGCACCATCA ACGTCAGCAG CGATGCCACC TACGGCAATC TGGCCGATGC GCTGGACGAC
ATCAGCGCCA GTGGCAACCC AGCTGCACAA CCCCTGATGT CCTGGAACGG AGACCTGTCG
CTGGAGTGGT ACCCGAACCC GGACACCCTG CTGGCCGGTG CGGTGTACTG GAAACAGTTC
AACGGCGGCA CCGCCACGGC GCTGGTGCCG GAGACCTACA CCATCGATGG ACAGAGCGTG
ACCGTGCCGG TGCGGCAGCA GGTGACCACC GACGAAGACA GCACGCTGAC CGGCTTCGAG
CTGAGCGCTA CCCATCGACT GTCGTACCTG CCCAAGCCGT TCGACGGGCT GGGCTTCAAG
GTCAGCTACA ACTACGCCGA TGCCGACTAC CACACCCAGG ATTCGCGGCT GGGCGAGCAG
CTGGCCAGTG ATGGCACGAT CATTCCGGCC ATCGTGCCAC CGGCGGGTCT GAGCGGTTTC
TCGCGGCACG TGCTGTCCGG TTCGATCTAC TGGGACGTTG GGCGCTTCAA CATCCAGGCC
ATCGGCAAGT TCCGCTCGCA CTATTACCAG GACTTCACTG GCAATACCGC TCAGCAGAAC
CGCTACTACG ACGACAACAC CAGCGTCGAC CTGCGCCTGC GTTACCGGGT GAACAAGCAG
TTGTCGCTGT CGCTGGAACT GATGAACCTG ACCAACGAGC CGCGCGTGGC CTACCAGCCG
CTTTATGGGA ACTTCCGCGA AGTGGTGACC TACGGGCGGC GTGCGTATTT CGGTGTACGA
TACAAGTTCT GA
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| Protein sequence | MRRPAGAVHS ISLSPTPLIV ALLAVLAGLP TAQAQSSKDA AGQDPTTLDQ VQVTGIRESM
QSSINKKRDD TVIADVLSAD DIGDLPAPSL ADAIETLTGA ASTRDKTGAS EISIRGLGAF
LSSTNFNGRE ITNGSGDRSV NFNMFPAELI NTVAIYKSQR ADIIEGGVAG TIGLETVRPL
EYGKRSAQID MRGSWAEYDK KYRDDDGIGY RGTASYIDQF EFGNGQKLGI SLGFQRLEGT
DPEESITSGS TWYACDGTQN VANANCGEVS AQAIANGAPY YLVPSSRIYR LKQERNDRQS
EFAALQWRPN DVVELNVDFE HTQRNWYENR SDLSLSNARR GITQREVDDE GIVRHLHGST
SIDSTSNRYW RGEEYTGGGL NLILRPSAAW ELSTDLSYSH TNRLDSERMT RLRANQRDVN
NAIVPGISSG ATGYVDYDWD WHGEVPSVAL APNFDPNNWD AYTGAARVTS SATENDHRIK
AGRFDASFMP ESGFFTRIKG GVRASQADYR LRDNTLVTDY DQRVAADKAK IIAANQACRA
PFPQDDFMDA ASGNTISSWA YFDPNCLYQS FRGSLDSGLD PGFQDPNNVD ITEKTRALYL
MGEFSSTLFG LPVTGNLGLR WVKTDVRSEG VRTGLRIEDN GDGTIRLQPT GDYSTQVFKA
GNDKLLPSLN AAFELRPDLL LRVGAYRAMS RPDIAALGAG RTINVSSDAT YGNLADALDD
ISASGNPAAQ PLMSWNGDLS LEWYPNPDTL LAGAVYWKQF NGGTATALVP ETYTIDGQSV
TVPVRQQVTT DEDSTLTGFE LSATHRLSYL PKPFDGLGFK VSYNYADADY HTQDSRLGEQ
LASDGTIIPA IVPPAGLSGF SRHVLSGSIY WDVGRFNIQA IGKFRSHYYQ DFTGNTAQQN
RYYDDNTSVD LRLRYRVNKQ LSLSLELMNL TNEPRVAYQP LYGNFREVVT YGRRAYFGVR
YKF
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