Gene Smal_2023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2023 
Symbol 
ID6476201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2266236 
End bp2269283 
Gene Length3048 bp 
Protein Length1015 aa 
Translation table11 
GC content63% 
IMG OID642731205 
Productacriflavin resistance protein 
Protein accessionYP_002028410 
Protein GI194365800 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0990325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCT CGTCATTCTC ATTGGCGCGT CCCCGCCTGA CCCTGCTGGC GATCGTTGCG 
ATCGTCCTCA CCGGCCTCAT TCTGGCGCTG GACTTCCCGT CCACTGAAGA GCCCCCCATC
ACCATTCGCA CGGCGACGGT ACTCAGCTTC ATGCCGGGCG CCGGCGTGGA CCGGGTCGAG
CAGCTGGTCG CTCGCCCGAT CGAGGAGAGC ATTCGTGGCA TGCCGGAGGT CAAGCGCATC
CGGACGACTG TTCGTCCAGG CTTTGCGTTC ACCTACGTTG ATCTCTATCC CACCGTGGAA
TCGGAAAAGA TCCCCATCGT GTGGCAGCGT TTGCGCTCGC GCATGGGGGA CATCCAGAGC
CAGCTTCCCG AGGGAACGAT TGGCCCGGTC GTGGACGACG AATTCGGTCG GGTTGCGGTG
ATGACCATGG GCCTGACCGG CGATGGCTAT AACGCAGGCG AGCTTCGGGC AGCGGCACGC
CGCCTGCGCG ATGAGCTGTT CCGGCTGCCC GGGGTGGAGC GTGTCTCGCT GCACGGCGTG
AGGGACGAGC AGGTCCAGAT CATCCTGGAC GTGCCTTCCC TGGCTGCGCG TGGGCTCAAC
CCCAATGTGA TTGCCGACGC GGTTTCCAGG CGCAATGTCA TTGCGCCGGC AGGTTACGTC
GAGATCGGAG GTTCGGAGAT CGCGCTCAAC GTGAGCGGTG ACGCCGACAA CCCCTCCCAG
CTGAAGAGCA CGCCAATTCC GCTGCCGAGG GGTGGCTCGG TGCCCCTGGG CGCCCTTGCG
CGAGTGGAAC GGGTGACCCA GGACCCGCCG ATGACCGGTG CATTCGTCAA TGGCACGCCG
GCCGTGGTGA TAGCGGTCTC CATGGCACCG GGACTCAACG TGGTGAGCTT CGCCGATCTG
CTGCGAGGCG ATGTTGAACG GCTTTCGGAA ACGCTGCCGG CCGGCATGCA GCTTGTCCAG
ATCACGGATC AGGCCGAGGT TGTTTCCACC CAGCTGCTGC GCGTTGCCAA GGTTTTCCTG
GAAACCCTGG CCATCGTCAT GGCGGTCGTC GTCCTGTTCC TTGGAATGAG GACCGGCCTG
ATCGTCAGCG CCATCGTACC GACCACGGTG CTGGGAACAA TGGCAATCAT GAAGATCCTG
AACATCGATC TGCACATGAT CTCGGTGGGT GCAATCATCA TTGCCCTGGG CTTGTTCGTT
GACAACGCGA TCGTGGTTGC CGAAGACATG GAGCGGCGGC TTTCGCTGGG TGAGACGCCG
GACCAGGCTG CCGCTCACGC AGGCAGCACG ATGTTCGTGC CGCTTCTGGT TTCTTCGCTG
GCGATCATCC TCGCGTTCAT GCCGCTGGCC ATCTCCAGCA CGGAAACCGG TGAGTATCTG
CGCAGTCTCG GCATCGTGAT GGCCATCGCC CTGCTGTTGT CACTGGTCAT CGGCGTTACC
CTGATTCCGC TGCTGTGCAA GCACTTTGCC CATCACCATG CCGAACTCAG CCGCACCGCA
CGCGCGGTCG AGCGGCTGAC GGGCTGGTAC CGTGGCAAGG TCCGCTGGAT CCTCGGGCAC
AAGGCCATCT ACATCGGTGT AATGGTTGCG CTGCTGGCAA CCTCCGGCTG GCTGTTCACC
ACCGTCCCCA ACGAGCTGAT GCCGCCGTCC GAGCGCCATC AGCTGCAGAT GGCCATCGAG
CTGTCGCCGG ATTCCAGCCC GGCCAATACG ATGGCTGTTG CTCAACAGAT CAGCAAGGTA
CTGGCCGACG AGAAGCTCGT TCCGGAGATC TCCAGCCATG CCCTGTACAT GGGCGATGGT
GGCCCACGCT TCATTCTGGC ACTGAATCCC CCTACTCCCG CAGGACACCG CGCGTATGCC
GTACTGTCCC TTGCGAAGGG CGTCAAGCAT GAAGCGGCCA TTGAGCGGCT GCGTTCTGTG
ATGGCAACAC ACTTCCCGGA TGTGCGGGTG GAGCCCAAGC GGTTCTCGAT GGGATCTTCG
GATGCCGGCG TTGCGACGTT CCGCATCTCC AGCAGCGACG GCGCACATCG GATTGCCGCC
GAGAAGCTGC TGCGCACGCT GCAGGACACG CCGGGGATGG TGGATGTATC CAGCGATGCC
GAACGCCAGG TTGTCCAGCT TGATGTGGAC GTCGATCAGC CCAAGGCCCA GGCCGCAGGC
ATCAGCAGCG CGGACATCGC GAAGAGCATG GACATGCTGC TGACCGGCGC AACGATCTCC
CGTTATCGTG AGGGCGACAC CGTTCTCCCG GTCATCCTCC GCGGAGAGGC GGCACTGCGC
ACGGATATCG TGCAGCTTGA GGCACTCCCG ATCCAGAAGG CGGACGGCAG CGGAAGCGTG
CCCCTGGGTC AGGTGGCCAA GCTTCGGTTG GCGCCGCAGC TGTCTTCAAT CCAGCGAGTG
AATCAGGCGC GGGCAGTCAG CGTGCTTGCA AAGAGTTCCG AGCTGACGGC CCAGGGGATC
GCGGACAAGG TCGAGCCACT TCTTTCCGAA TTCCGCAAGC AGGGCGTGCG GGTTGAGCTC
GGTGGCGAGA TCGAAGAAAG CAAGAGTGCC AACGAGGGCA TCGAGAAGCT GCTCCCGCTC
TGCCTTGCTG CCATGTTCCT GTTGTTCGTA TGGCAGTTCG AGAGCATCCG CAAGAGCTTG
ATCGTCCTGG CGAGCATTCC GTTCGTGGTC ATCGGCGCGA CCTTGGCACT CAAACTGAGT
GGTACCAGCC TGACCTTCAT CGGAACACTT GGGCTGCTCG CACTTGCCGG CATCATCGTC
AACAACGCGA TTCTGCTCAT CGATGCGATC GACGAAGGCC AGCGCGATGG CTTGCCTCCT
CTCCAGGCCA TTGAAGAGGC TGCGGCAAAG CGCTTGCGGC CCATCGTCAT GACCAAGATG
GTCTGCATTC TAGGCCTTGT CCCGCTGCTG CTGTTTGGCG GCTCCATGTG GACCAGCATG
TCGATCGTGA TGATCGGCGG CCTCGCCCTT GGAACGCTGA TCACGCTGGG TCTCATTCCA
GCGCTGTATG CCGCGCTCTA CCGCATTCAC CCGACCGAGG AGGCATGA
 
Protein sequence
MSLSSFSLAR PRLTLLAIVA IVLTGLILAL DFPSTEEPPI TIRTATVLSF MPGAGVDRVE 
QLVARPIEES IRGMPEVKRI RTTVRPGFAF TYVDLYPTVE SEKIPIVWQR LRSRMGDIQS
QLPEGTIGPV VDDEFGRVAV MTMGLTGDGY NAGELRAAAR RLRDELFRLP GVERVSLHGV
RDEQVQIILD VPSLAARGLN PNVIADAVSR RNVIAPAGYV EIGGSEIALN VSGDADNPSQ
LKSTPIPLPR GGSVPLGALA RVERVTQDPP MTGAFVNGTP AVVIAVSMAP GLNVVSFADL
LRGDVERLSE TLPAGMQLVQ ITDQAEVVST QLLRVAKVFL ETLAIVMAVV VLFLGMRTGL
IVSAIVPTTV LGTMAIMKIL NIDLHMISVG AIIIALGLFV DNAIVVAEDM ERRLSLGETP
DQAAAHAGST MFVPLLVSSL AIILAFMPLA ISSTETGEYL RSLGIVMAIA LLLSLVIGVT
LIPLLCKHFA HHHAELSRTA RAVERLTGWY RGKVRWILGH KAIYIGVMVA LLATSGWLFT
TVPNELMPPS ERHQLQMAIE LSPDSSPANT MAVAQQISKV LADEKLVPEI SSHALYMGDG
GPRFILALNP PTPAGHRAYA VLSLAKGVKH EAAIERLRSV MATHFPDVRV EPKRFSMGSS
DAGVATFRIS SSDGAHRIAA EKLLRTLQDT PGMVDVSSDA ERQVVQLDVD VDQPKAQAAG
ISSADIAKSM DMLLTGATIS RYREGDTVLP VILRGEAALR TDIVQLEALP IQKADGSGSV
PLGQVAKLRL APQLSSIQRV NQARAVSVLA KSSELTAQGI ADKVEPLLSE FRKQGVRVEL
GGEIEESKSA NEGIEKLLPL CLAAMFLLFV WQFESIRKSL IVLASIPFVV IGATLALKLS
GTSLTFIGTL GLLALAGIIV NNAILLIDAI DEGQRDGLPP LQAIEEAAAK RLRPIVMTKM
VCILGLVPLL LFGGSMWTSM SIVMIGGLAL GTLITLGLIP ALYAALYRIH PTEEA