Gene Smal_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2003 
Symbol 
ID6476181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2242545 
End bp2243114 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID642731185 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002028390 
Protein GI194365780 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.323672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAA CCACCGCCGA TACCCAACAG AAGATCCTGG CCACGGCCGA GGCGCTGATC 
TACCAGAACG GGATCCACGC CACGGGCATG GACCTGCTGG TGAAGACCTC CGGCGTTGCC
CGGAAGAGCA TCTACCGCCA CTTTGAAAAC AAGGATCAGG TGGCCGCTGC GGCATTGAGA
GCGCGCGACG TGCGTTGGCT GGCCTGGTTC CAGCAGGAGT GCGACAAGGC CAATACTGCG
GAAGCACGCA TCCTGGGCAT GTTCACCGTA CTCAAGGGCT GGTTCCAGTC CGAGGGCTAT
CGCGGCTGTG CCTTCATCAA CACCGCGGGC GAGGTCGGCG ATCCCGACGA TCCGATTCGC
CACATCGCAA AAGATCACAA GCAGAAGCTG CTCGATTACA CGCTGGAACT GACCGGGCAA
CTGGATATCC AGCAGCCGGC AGCGCTGGCG CGTCAGCTGC TGGTTCTCAT GGAAGGCGCC
ATCACCGTCT CGCGCGTGAT GGGCGACTAC GACGCCGCAG ACACTGCAAG GGATGTTGCA
GCGGTGTTGT TGGAGCAGGC CAGGCGCTGA
 
Protein sequence
MNTTTADTQQ KILATAEALI YQNGIHATGM DLLVKTSGVA RKSIYRHFEN KDQVAAAALR 
ARDVRWLAWF QQECDKANTA EARILGMFTV LKGWFQSEGY RGCAFINTAG EVGDPDDPIR
HIAKDHKQKL LDYTLELTGQ LDIQQPAALA RQLLVLMEGA ITVSRVMGDY DAADTARDVA
AVLLEQARR