Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2003 |
Symbol | |
ID | 6476181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2242545 |
End bp | 2243114 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642731185 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002028390 |
Protein GI | 194365780 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.323672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACAA CCACCGCCGA TACCCAACAG AAGATCCTGG CCACGGCCGA GGCGCTGATC TACCAGAACG GGATCCACGC CACGGGCATG GACCTGCTGG TGAAGACCTC CGGCGTTGCC CGGAAGAGCA TCTACCGCCA CTTTGAAAAC AAGGATCAGG TGGCCGCTGC GGCATTGAGA GCGCGCGACG TGCGTTGGCT GGCCTGGTTC CAGCAGGAGT GCGACAAGGC CAATACTGCG GAAGCACGCA TCCTGGGCAT GTTCACCGTA CTCAAGGGCT GGTTCCAGTC CGAGGGCTAT CGCGGCTGTG CCTTCATCAA CACCGCGGGC GAGGTCGGCG ATCCCGACGA TCCGATTCGC CACATCGCAA AAGATCACAA GCAGAAGCTG CTCGATTACA CGCTGGAACT GACCGGGCAA CTGGATATCC AGCAGCCGGC AGCGCTGGCG CGTCAGCTGC TGGTTCTCAT GGAAGGCGCC ATCACCGTCT CGCGCGTGAT GGGCGACTAC GACGCCGCAG ACACTGCAAG GGATGTTGCA GCGGTGTTGT TGGAGCAGGC CAGGCGCTGA
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Protein sequence | MNTTTADTQQ KILATAEALI YQNGIHATGM DLLVKTSGVA RKSIYRHFEN KDQVAAAALR ARDVRWLAWF QQECDKANTA EARILGMFTV LKGWFQSEGY RGCAFINTAG EVGDPDDPIR HIAKDHKQKL LDYTLELTGQ LDIQQPAALA RQLLVLMEGA ITVSRVMGDY DAADTARDVA AVLLEQARR
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