Gene Smal_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1948 
Symbol 
ID6476055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2190617 
End bp2192800 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content68% 
IMG OID642731130 
Producthistidine kinase 
Protein accessionYP_002028335 
Protein GI194365725 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0644671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.181036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCGA TACCCGCTGC ACTTGCAGAG ACAGCGCCAT TTCCCACGCT CGCCCACGGC 
TATGCAGGCC TGGTAGCGCG GCATGCACAA CTGCGTTTCC TGGACCTGCC CTATCCCACC
ACCGCCGCAT CGGTGGCCGC CGTCTGTGGC CGCGACGCCG ACCTGGTACT GGTGATGGGC
GGCTCCGGAC ACCCGCAACT CCCCTGTCCA GAGCTGGTTG CCTCCGCCCC GTTTCGCGGT
GGCCGGACGG TCCTCGCCGG GCAACCCGGC CGTTGGCTGC CACGCGGCTT GCCTGATCTG
GAGGGGAAGA TCCTGGCGGT GGTTGAGGGT GGACCCTACG CTGGCTGGTT GGGTACACAT
CATCCACGGA TCCATCTACT GCAGCTTCCG GATCGTCACG CGGCACTCGC GGCGGTCGTT
GCCGGTACCG CCGATGCCGC GATCGGCTTG GAGACGACGC TGCGACCAAT GACCCGCCGC
TATTTCAGTG GTGACCTGCT GCTGCAACCG ATCAGCAGCG ATTTCTCCAC CGACCTGCAT
CTGCTCGCCC GTCGGGAGGA CAGGCACCTG CTTGAACGCA TCGACCGGGG CCTGCGCGAC
ATCACGCTGG AAGAGCACGC TGGCCTGCTG CATCTCTGGG CGCAGCAGAT GCTGCCCGCA
TCGGTGGAGC GGGCACTGGG CTGGATGCGG TCACCACCAC CGGCCTGGTT GCTGGCATTG
ATCGCCGCGC TGGCCGGGCT TCCACTTCTC TGGCATCCGC TGCGCCGTCG CTTCAGCCGC
AGCGAGCGCG ACCGTGCACG CGCGATCGGC ATGATCAGCC ATGAGGTGCG CAATGCCGCG
CAGACGCTGT TGGGCTCGAT CACCCCGCTG CACCAGGCCC ATTCGCCAGA GGGCCGCCGC
GAACTACTCG CGGCGATGGC TGCCGCAGGA CGCTCCCTGC GCGGACTGCT GGACCGCTCG
CTGGATTTTT CGCGCCTCGC CAGTGGTGGC TTCATGCCGC AGGTACAAGC CTGCGATGTC
GCACTGCTCT GCAACCAATC GCTGGATGCG ATCCGCGTGC TCGCACGCAG GAAGGGCCTG
GAGCTCAGGC TGGACTGCAC TGCAGCGCCG GCGCCGCTGG TCCTGCTGGA TCCCGATGCG
CTGCGCCAGA TCGTCGACAA CCTGCTCGGC AATGCGCTGA AGTTCACCGA CGTCGGCGGC
ATCGATCTGC GCGTGCAGCT GCGGCCACCA ACGCGCCCGC ATGAGCTGCT GCTGGATGTG
ATCGACAGCG GCATTGGCAT CCCTGCTGCG CAGGCTACAT CCCTGTTCCA ACCCTTCCGG
CAGGGTGAGG ACGGGCTGCG GCGCGGCGGC AGCGGACTGG GGCTGGTGAT CGCGCGCGAA
CTGGCCCGCT CGATGGGCGG CGATCTGACT GTTCACAGCG TCCACGGACG CGGCAGCCGA
TTCACCCTGC GCCTGCCGGT GCGGATCGCC CGGTCCCACC CGCCGACTGC GACGGTGGCC
GCTCATGAGC AGCCGCTTGC TGGCCTGGAT CTGTTGCTGG TCGAAGACCA TGATCTCAAC
CGCCGCCTCA TGGCCGCCCA GCTGCAGCGT TTGGGGGCGG ATGTGCATGC GCTTGCCGAT
GCCAGCGACG CACTGGAAGA GCAGGCGCGT CGACCGCGCA GCACGGTGCT GCTCGACATC
GGGCTTCACG ACATGGATGG CTATGCGCTG GCCCGCCGGC TGCGTGCGCG TGCGCACACG
CCCTTGCGGT TGATCGCATT GTCGGCACGC GCGGGCCGCC GCCATGCGGC GCGCTGTCGC
GAGGCGGGAT TCGACGCGGT GCTGGCCAAG CCACTGCAGA TCGCCAAGCT GCTGCAGGTG
CTGGCGTTGC CAGCGCTACG GGGCCACGCT GCACCCTCCA GCACGGCATG CATTGACTCC
GCCTATGCGG CCGACATCAG CACGGAACTG GCTGCCATCG AGCGCGCCGT TACCGGCGCC
GCTCCGGATG CACTGCGCCA CCACGCGCAT CGCCTGCAAG GTACGCTGCA GATCTGTGGC
GCAACGACAC AAGCCGATAT CGCGGCCGAA CTGTGGGAGC TGGGGCGTAT GGCCGCGCCT
GACTGGGTCG AGGCGCGGCG ACTGCTGCAG GGATTGCAGC AGTGGCACGG CTCCCGCAAA
GCGGAAGCCG CACCATCGGC ATGA
 
Protein sequence
MRPIPAALAE TAPFPTLAHG YAGLVARHAQ LRFLDLPYPT TAASVAAVCG RDADLVLVMG 
GSGHPQLPCP ELVASAPFRG GRTVLAGQPG RWLPRGLPDL EGKILAVVEG GPYAGWLGTH
HPRIHLLQLP DRHAALAAVV AGTADAAIGL ETTLRPMTRR YFSGDLLLQP ISSDFSTDLH
LLARREDRHL LERIDRGLRD ITLEEHAGLL HLWAQQMLPA SVERALGWMR SPPPAWLLAL
IAALAGLPLL WHPLRRRFSR SERDRARAIG MISHEVRNAA QTLLGSITPL HQAHSPEGRR
ELLAAMAAAG RSLRGLLDRS LDFSRLASGG FMPQVQACDV ALLCNQSLDA IRVLARRKGL
ELRLDCTAAP APLVLLDPDA LRQIVDNLLG NALKFTDVGG IDLRVQLRPP TRPHELLLDV
IDSGIGIPAA QATSLFQPFR QGEDGLRRGG SGLGLVIARE LARSMGGDLT VHSVHGRGSR
FTLRLPVRIA RSHPPTATVA AHEQPLAGLD LLLVEDHDLN RRLMAAQLQR LGADVHALAD
ASDALEEQAR RPRSTVLLDI GLHDMDGYAL ARRLRARAHT PLRLIALSAR AGRRHAARCR
EAGFDAVLAK PLQIAKLLQV LALPALRGHA APSSTACIDS AYAADISTEL AAIERAVTGA
APDALRHHAH RLQGTLQICG ATTQADIAAE LWELGRMAAP DWVEARRLLQ GLQQWHGSRK
AEAAPSA