Gene Smal_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1941 
Symbol 
ID6476048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2183108 
End bp2184157 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content68% 
IMG OID642731123 
Productperiplasmic binding protein 
Protein accessionYP_002028328 
Protein GI194365718 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4558] ABC-type hemin transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.789164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.251316 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG CGTCCCGTCT GCGCCTGTGT GCGCTTCCGT TGGCTGTCTC GCTGGCACTG 
GCCGCCTGTG GCGGTTCATC GACGCCCTCG GACAGCGGCA AGCCGGTTGA GCCCGCCGCC
GCCGCAACCG CGGCTGGCGA AGTTGCGTTG CCTGCAGGCT GGCAGCGCGT GGCCGGCACC
GATATGCCGG CCGTGCGCGA CCAGAAGGCA GTGCTGCCGG CCAAGGTGCA TTCCGATGAC
GGCGCCGACG TCGAGGTGGC CGATACCAGC CGCATCATCG CCGGTGGTGA CGACGTGATC
GCGGTGATCG AGGCGCTGGG ACTGGACAAG CAGGTGTTCG CCGCGCCGAC CAATACCACC
ACCCAGGCTG GCCTGGCTGC CCCGCACCAG TTCCTGTTCA ACCGCACCAC TGGCGTGGAG
GGCGTGCTGA GCCTGCAGGG CTCGCTGTTC CTCGGCAACA GCCTGCGCCG CCACACCGAG
CTGGCGAAGA AGCTGCGTGA GGTGGGCGAA CCGGCGGTGG TCATCGATGA CCTGCAGCCG
GCGCCGGACA AGGTGCGCAA GGTCGCCGCC GCACTAGGGC TGGCCGAGGC AGGGCAGACA
CTTGCCACGC AGGTGCAGCG TCAGCTCGAT GAGGCTGCAG CGATTGGCAA GGGCCTGGGC
CATGCGCCAC GACTGATCCA CGTGTCGGCC ACCGGCGCCG GTGGCTCACC GACTGTTGCG
GGTGCCGACA GCGCATCGGC GCAGCTGATC GCACTGGCTG GTGGTGTCAA CATCGGCACC
GAGGCGGGGG TGAAGAACTA CTCGCAGCTC AGCAATGAGG GCGTAGTCGC TGCCGCACCG
GAGGTGATCC TGGTGACCGA GCATGACCTG CAGCTGTTCG GTGGTGCCGA GGGCCTGTGG
AAGGCGTACC CGACGCTGAA GCAGACCCCG GCCGGGCAGG CCAATCGGGT CTGGGTGATG
CCGGATGTGC AGCTGAAGTA CACCAGTGTC GGATCAGGTG CTGGTGCGCT GGCGCTGGCC
AAGGCTCTGG CGGCGTTGCC GAAGGCATGA
 
Protein sequence
MNIASRLRLC ALPLAVSLAL AACGGSSTPS DSGKPVEPAA AATAAGEVAL PAGWQRVAGT 
DMPAVRDQKA VLPAKVHSDD GADVEVADTS RIIAGGDDVI AVIEALGLDK QVFAAPTNTT
TQAGLAAPHQ FLFNRTTGVE GVLSLQGSLF LGNSLRRHTE LAKKLREVGE PAVVIDDLQP
APDKVRKVAA ALGLAEAGQT LATQVQRQLD EAAAIGKGLG HAPRLIHVSA TGAGGSPTVA
GADSASAQLI ALAGGVNIGT EAGVKNYSQL SNEGVVAAAP EVILVTEHDL QLFGGAEGLW
KAYPTLKQTP AGQANRVWVM PDVQLKYTSV GSGAGALALA KALAALPKA