Gene Smal_1822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1822 
Symbol 
ID6475775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2046859 
End bp2047761 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content67% 
IMG OID642731004 
Productresponse regulator receiver protein 
Protein accessionYP_002028209 
Protein GI194365599 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.332263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.137599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAACA ATGGCGGCAT GGAAAATGGA GATCCGGCGG TCGATCCCGC CCTTGTTGCA 
GATCGTCCCA ACCGCGCGGG CATGGCTGCA GTGTTCTGGT CGCTGCTGTT CCTGTGTACC
GCTGCGGGCA ATGTGCTGGC GCAGTGGATG CGGGCATTGC GGGACGCCCA GCCATTCCCG
GGCCTTGCGG CTTCGATCGA GGAGTTCAGC AGTGCGCTTG CCAGCCTGGG CCTGCTGGCA
CTTCTGCATG CCGCCGCTCA CCGGTGGCCG TTGCATGCAG ACACCTGGCG GCGCCGGATC
GGCTTCTACG TGCTGGGTGG CGTTGCCTGG TGGCTGTTGC ATGTCAGTGC CATGGTGCTG
ATGCGCAAGC TGGCCTTCGC CCTGATTGGC CAGCACTACA CCTATGGCGC CTGGCCGGCG
CAGTGGTTCT ACGAGTTCTT CAAGGACGTG CAGACCTACA GCCTGCTGGT GATTGCCGTG
CACGCCGTGG CCTGGTTCGG CCGCCAGCGG CAGGGTGAAG CGCACCTGCT GACCGAGCCC
GACGTCGGCC CGCCGGTGGA GCCGGTCGAG CGCCCCCAGC ATTTCCTGGT TCGCAAGCTG
GGCAAGGAAT TCCTGGTGGC CACCGCGGAC GTGGAGTACG CCCAGGCGGC GGGGAACTAC
GTGAACCTGC GGGTACGCGG CCACGACTAC CCGCTGCGGA TCACCATGGC GGTACTGGAA
CAGCGGCTGG ACCCGGGCGA GTTCCTGCGT CCGCACCGCA GCTGGCTGAT CCACCGTAGC
CAGTTGCGCT CGATCGAGCC GCTGGACGGC GGCGAGGCCC TGCTGCATAT GGCCGATGGG
GCCAAAGTGC CCTGCAGCCG GCGCCAGCTG CCAGTGCTGC GGCAGGCGCT GGGGGCAGGG
TGA
 
Protein sequence
MGNNGGMENG DPAVDPALVA DRPNRAGMAA VFWSLLFLCT AAGNVLAQWM RALRDAQPFP 
GLAASIEEFS SALASLGLLA LLHAAAHRWP LHADTWRRRI GFYVLGGVAW WLLHVSAMVL
MRKLAFALIG QHYTYGAWPA QWFYEFFKDV QTYSLLVIAV HAVAWFGRQR QGEAHLLTEP
DVGPPVEPVE RPQHFLVRKL GKEFLVATAD VEYAQAAGNY VNLRVRGHDY PLRITMAVLE
QRLDPGEFLR PHRSWLIHRS QLRSIEPLDG GEALLHMADG AKVPCSRRQL PVLRQALGAG