Gene Smal_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1678 
Symbol 
ID6475548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1890998 
End bp1891915 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content70% 
IMG OID642730859 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002028065 
Protein GI194365455 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA AGTTCGACTA CCTGGGCGAC GTGGAGGTGT TCCTGGCGGT GGTCGAGCAC 
GGCTCGTTCA CCGCGGGCGC GGTGGCGCTG TCCACCACGC CCTCGGTGCT GAGCCGCGCG
GTTACCCGCC TGGAAGCGCG GCTGGGCCGG CAGCTGCTGC AACGGACCAC CCGCCGCGTG
GGCCTGACCG ACGCCGGGCG GCTCTATCTG GAACAGGTGC GCACCGCCTT CGGCCTGCTG
GACGACGCCG AGCGCGACGT ACTGGCCCAG GACGGTGCGC TGGCCGGCCG CGTGCGCCTG
AGCGTGCCCA CCACCTATGG CCACTACCGG CTGCCACCCG TGCTGGCGCG CTTTGCGCAG
CTGTACCCGC AGGTGCAGGT GGAACTGAAC ATCACCAACC GCAACGTAGA CCTGGTGGCC
GAAGGCTTCG ACCTGGCCAT CCGCCTGGGC CAGCTGCCGG ACAGCGGGCT GGTGGCGCGA
AAGCTGGAAG ACGCCCCGCT GCTGCTGGTG GCCACGCCGG ACTACCTGCA GCGCCGCGGC
TCGCCGCAGA CGCTGGACGA CCTGCAGCAG CATCTGTGCC TGCCCTTCGT GATGCCGCGC
ACCGGCCGGC TGGCCCCTTG GATATTCCGC GATGACGGGC GCGACGTGGA CTGGCTGCCG
CGTTCGTCCA TCGAGACCTC CGACGATGTG CTGGGCGTGG TGTCGCTGGC CGAACAGGGC
ATCGGCATCT GCCAGAGCTA CGAGTTCATC GTGCGCGAGC GATTGCAGCG CGGGCAGCTG
GTGGAAGTGC TGCAGCAGTT GCGCGGGAGA TCGCGGCCAT TCTCGGTGAT CTATGCGCCG
CATCGGCGGC AGTCGGCGGC GGCGCGGGCG ATGATTGAGT TGCTGGTGGG GAATGCGGCC
GAGGCTGCCG TTGGTTGA
 
Protein sequence
MSRKFDYLGD VEVFLAVVEH GSFTAGAVAL STTPSVLSRA VTRLEARLGR QLLQRTTRRV 
GLTDAGRLYL EQVRTAFGLL DDAERDVLAQ DGALAGRVRL SVPTTYGHYR LPPVLARFAQ
LYPQVQVELN ITNRNVDLVA EGFDLAIRLG QLPDSGLVAR KLEDAPLLLV ATPDYLQRRG
SPQTLDDLQQ HLCLPFVMPR TGRLAPWIFR DDGRDVDWLP RSSIETSDDV LGVVSLAEQG
IGICQSYEFI VRERLQRGQL VEVLQQLRGR SRPFSVIYAP HRRQSAAARA MIELLVGNAA
EAAVG