| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1639 |
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| Symbol | |
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| ID | 6475509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 1848518 |
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| End bp | 1849750 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642730821 |
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| Product | TraB family protein |
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| Protein accession | YP_002028027 |
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| Protein GI | 194365417 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
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| TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.840587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.624161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAAT CCATGACTGA AACCCTTCCT GACACCGGCG ACGACCTGTT CGCCGGCCAG
CCGGTACGCA TCGTTGAACG CGACGGCGTG CGCTACACCC TGCTCGGCAC CGCGCACGTT
TCCCGCGCCA GCGTCGAAGC GGTGGAAAAA GCGATCGACA GTGGCCGCTT CGACGCGGTG
GCCGTCGAGC TCGATCCGCA GCGCCTGCAG GCCCTGAGCG ACCCGGACAC GCTGGCCAAG
CTCGACCTGG TCGAGGTGAT CCGCAAGGGC CGCGTCGCCC TGTTCGCCGC CAACCTGGCG
CTGTCCGCCT ACCAGCGGCG CCTGGCAGAA CAGCTCGACA TCGAGCCGGG TGCCGAACTC
AAACGCGCGG TGGAGCTGGC CCGCGAGCGC GATCTGCCGG TGCACCTGAT CGACCGTGAA
GTCGGCCTGA CCTTCCGCCG TGCATCGCAG CGGCTGGGCT TCTTCGGCAA GCTGAAGCTG
GTCGCTGGGC TTGGCGCCGG CCTGTTCTCG TCGGAGGAAG TGGGCGAGAA CGAGATCGAG
AAGCTCAAGC AGGGCGACAT GCTGGAGTCG AGCTTCGGCG AGTTCGCCAG CGAGAGCCCG
GCGCTGTACG AGACCATCAT CGGCGAGCGC GACCGCTACA TGGCCACGCG CCTGCGCGAA
GCGCACGACC CGCAGCAGCG CGAAGTGCTG GCGGTGGTCG GTGCCGGTCA CCTGGCCGGG
CTGGCACGCT ATCTGGAAAC CGACACCGAG GCACCGGCAC CGCTGCGCGC CGAGCTGGAA
TCGGTGCCGA AGAAGCGCAA CATCCCGTGG TTCACGCTGG GCATCCTGGC CATCGTAGCG
ACCGGCATCG GCGTGGGCTT CTATCGCGGC GGGCTGGGTG TGGGCACCGA GCTGCTGGCA
ACCTGGGCGA TGTACACCGG CGGCCTGGCC GGCCTGGGCT GCCTGCTGGC CGGTGGCCAT
CCGCTGAGCA TCCTGACCGC GATTGCGGTA GCGCCGTTCA AACCGTTCCG CTTGAGCATT
CCAACCGGCG CGTTCTCGGC GCTGGTGGAA GCACGCCTGC GCAAGCCGGC GTACGAGGAC
TTCCTGAAAC TGCGCGACGA TGCGCAGAGC CTGAAGGGCT GGTACCGCAA CCGCGTCACC
CGCGTGGTGC TGACCTTCAT GTTGACCAAC CTGGGCAGCA TGCTCGGCCT GTGGCTGACC
ACGTTCAAGG TGTGGGGCAA GGTGGCGGGC TGA
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| Protein sequence | MNESMTETLP DTGDDLFAGQ PVRIVERDGV RYTLLGTAHV SRASVEAVEK AIDSGRFDAV
AVELDPQRLQ ALSDPDTLAK LDLVEVIRKG RVALFAANLA LSAYQRRLAE QLDIEPGAEL
KRAVELARER DLPVHLIDRE VGLTFRRASQ RLGFFGKLKL VAGLGAGLFS SEEVGENEIE
KLKQGDMLES SFGEFASESP ALYETIIGER DRYMATRLRE AHDPQQREVL AVVGAGHLAG
LARYLETDTE APAPLRAELE SVPKKRNIPW FTLGILAIVA TGIGVGFYRG GLGVGTELLA
TWAMYTGGLA GLGCLLAGGH PLSILTAIAV APFKPFRLSI PTGAFSALVE ARLRKPAYED
FLKLRDDAQS LKGWYRNRVT RVVLTFMLTN LGSMLGLWLT TFKVWGKVAG
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