Gene Smal_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1627 
Symbol 
ID6475497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1829432 
End bp1830997 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content68% 
IMG OID642730809 
Producthypothetical protein 
Protein accessionYP_002028015 
Protein GI194365405 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.248376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.381468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACCG ACAGCCCCCG TTTCGACAAC CGCCTGCTGC ACATGCTGCC AGGCGACCCC 
GAATCCGGCC CACGCCGCCG CGAAGTGCTG GGCGCCGCCT GGTCGCCAGT GATGCCGACC
CCGGTGACGG CGCCCACGCT GCTGGCCTGG GCACCGGATG TCGCCGAGAT GCTTGGCTTC
GATACCGCTG AGGTCGAGAG CGAAGGCTTC GCGCAAGTGT TTGGCGGCAA TGCACTGTAC
GCCGGCATGC AGCCATGGGC AGCCAACTAC GGCGGCCATC AGTTTGGTCA CTGGGCCGGT
CAGCTCGGCG ATGGGCGTGC GATCTCGCTG GGTGAACTGG TCGCGCCGGA TGGCCGTCAC
TGGGAGCTGC AGCTGAAGGG GGCCGGCCCG ACGCCGTACT CACGCGGGGC GGATGGTCGT
GCCGTGCTGC GCTCGTCGAT CCGCGAATTC CTGTGCAGCG AGGCGATGCA TCATCTGGGT
GTGCCGACCA CGCGCGCGCT GTCGCTGGTA GGCACCGGCG AAGACGTGAT GCGTGACATG
TTCTATGACG GCCATCCGCG CGCCGAGCCC GGCGCCATCG TATGCCGGGT GTCGCCGTCG
TTCCTGCGCT TCGGTTCGTT CGAGCTGCCT GCGTCGCGTG GTGAAACCGC GTTGCTGCAG
CAGCTGGTTG ATGCCTGCAT CGCCCGCGAT TTCCCCGAGC TGGAAGGGGA GGGCGAGACG
CTGTACGGCG ACTGGTTCGC GCAGATCGCG GTGCGCACCG CCGAGATGAT CGCGCACTGG
ATGCGCGTGG GTTTCGTGCA TGGCGTGATG AACACCGACA ACCTGTCCGT GCTCGGCCTC
ACACTCGATT ACGGCCCTTA CGGCTGGGTC GAGGACTTCG ATCCGGATTG GACGCCGAAC
ACCACCGACG CACAGGGCCG CCGTTATCGT TTCGGTACCC AGCCGCAGGT GGCGTACTGG
AACCTGAGCC GATTGGCGCA GGCACTGTCG CCGTTGTTTG CCGATGTTGC GCCACTGCAG
GCGGGCTTGG CGGCGTATCA GTCCACCTTC GTGGCCTGCA CGCGTCGCGA TGCTGCCGCC
AAGCTCGGCC TGGCCGCGGC CGACGATGAC GACCTGCAGC TCTACCTGCG CTGGCAGCAG
CTGATGCAGG ACGGTGCCAT GGACATGACC CTGGCTTGGC GCGCGCTGAT GCGCCTCGAT
CCGGCCGCAC CGGATGCGGC GCTGCTGGAC GCGGTGTACT ACGACGAGGC GCGCCAACAG
GCGGTGCAGG CACCGTTGCA GCACTGGCTG CAGGACTACG CGGCAAGGTT GCAGGCTGAT
CCGCTGTCGG CCAGTGAGCG CACGGCGAAG ATGGCCGCGG CCAATCCGCT GTACGTGCTG
CGCAACTGGC TGGCCCAGGA GGCCATCGAC CGCGCGGAGC AGGGCGACCT CGGCGGTGTC
CATGCGTTGC AGGACGTGCT GCGCGATCCA TACACCGAGC GCCCGGGGCT CGAGCACTTC
GCGGGCAAGC GCCCGTCCTG GGCCGACAAT CGCGCCGGCT GCTCGATGCT GTCCTGCAGT
TCCTGA
 
Protein sequence
MDTDSPRFDN RLLHMLPGDP ESGPRRREVL GAAWSPVMPT PVTAPTLLAW APDVAEMLGF 
DTAEVESEGF AQVFGGNALY AGMQPWAANY GGHQFGHWAG QLGDGRAISL GELVAPDGRH
WELQLKGAGP TPYSRGADGR AVLRSSIREF LCSEAMHHLG VPTTRALSLV GTGEDVMRDM
FYDGHPRAEP GAIVCRVSPS FLRFGSFELP ASRGETALLQ QLVDACIARD FPELEGEGET
LYGDWFAQIA VRTAEMIAHW MRVGFVHGVM NTDNLSVLGL TLDYGPYGWV EDFDPDWTPN
TTDAQGRRYR FGTQPQVAYW NLSRLAQALS PLFADVAPLQ AGLAAYQSTF VACTRRDAAA
KLGLAAADDD DLQLYLRWQQ LMQDGAMDMT LAWRALMRLD PAAPDAALLD AVYYDEARQQ
AVQAPLQHWL QDYAARLQAD PLSASERTAK MAAANPLYVL RNWLAQEAID RAEQGDLGGV
HALQDVLRDP YTERPGLEHF AGKRPSWADN RAGCSMLSCS S