Gene Smal_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1593 
Symbol 
ID6475463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1789790 
End bp1790182 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content64% 
IMG OID642730775 
ProductSmpA/OmlA domain protein 
Protein accessionYP_002027981 
Protein GI194365371 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2913] Small protein A (tmRNA-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAATC TCCTGTTGGT CGCCGCCGTC GCCCTGTCCA CCACCGGGTG CGGCATCATC 
TACAAGCAAC CCATCTATCA GGGCAACCTG ATCCGGGAAG ATGCCGTGGC CAAGCTGCAG
GTCGGGCAAA GCAAGCAGCA GGTCACCGCG CTGCTGGGCA CCCCGTCCAT TCCCGACCCG
TTCCATGCGC AGCGCTGGGA CTACACCGCC AGCCAGCGCG TGAACCGCCT GGGCCGTACC
GAGGTGAAGA ACTTCACCGT GTTCTTCGAG AACGACAACG TGACCCGTTG GGAAGGCGAG
TATTTCCCGG GCAACGACAA GGCCCTGGCC CAGCAGACCG TCCGCCAGTT CGGCCGCAAC
CTGCCGAAGG ACAAGAAGAA GAAGGGCCGC TGA
 
Protein sequence
MRNLLLVAAV ALSTTGCGII YKQPIYQGNL IREDAVAKLQ VGQSKQQVTA LLGTPSIPDP 
FHAQRWDYTA SQRVNRLGRT EVKNFTVFFE NDNVTRWEGE YFPGNDKALA QQTVRQFGRN
LPKDKKKKGR