Gene Smal_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1560 
Symbol 
ID6475429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand+ 
Start bp1756016 
End bp1756627 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content65% 
IMG OID642730742 
ProductInorganic diphosphatase 
Protein accessionYP_002027948 
Protein GI194365338 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.28321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.553892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GCCGTATCGT CCCGATGGCC GCCATCGCCG GCGCACTGCT GCTTCTGGCC 
GGTGCGGTTG CCGCCGCCGA CGCGGTGCTG CATCCGTTCC TGGTCGCGCA GCCGAAGCAG 
GCCCCGCAGG AGGTGAACCT GGCGGTGGAG ATCCCCGCTG GCAGCTTCAC CAAGTACGAA 
ATCAAGGAAG ACGGTTTGGT ACACGTAGAC CGCTTCCAGT CGATGCCGGT GGCCTATCCG 
GCCAACTACG GTTCGATGCC GCGCACCTTG GCCGGCGACA ACGATCCGCT GGATGCGCTG 
GTGTTGACCC GCGAGCCACT GCATCCGGGC GTGATCGTGC GCTTCCGGCC GATCGGCTAC 
CTGAAGATGA TCGACGGCGG CGAGCATGAC GAGAAGATCA TCGGTGTTCC CACCGACAAG 
GTCGACCCGA CCTACGCCAA CATCCGTGAC CTGAAGGATC TGCCGGAGGT CGAGCGCCAG 
CGCATCGAGG CCTTCTTCCG GGTCTACAAG GACCTGCCGG CGGGGCGCAA TCCGGTGCAG 
CTCAACGGCT GGGGCGATGC CGCCGAAGCG CGTGTGCTGA TCAGCGAGGC GATGCAGCGT 
TTCGAGAAGT AG
 
Protein sequence
MTTRRIVPMA AIAGALLLLA GAVAAADAVL HPFLVAQPKQ APQEVNLAVE IPAGSFTKYE 
IKEDGLVHVD RFQSMPVAYP ANYGSMPRTL AGDNDPLDAL VLTREPLHPG VIVRFRPIGY 
LKMIDGGEHD EKIIGVPTDK VDPTYANIRD LKDLPEVERQ RIEAFFRVYK DLPAGRNPVQ 
LNGWGDAAEA RVLISEAMQR FEK