Gene Smal_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1558 
Symbol 
ID6475427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1753525 
End bp1754640 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content66% 
IMG OID642730740 
ProductNHL repeat containing protein 
Protein accessionYP_002027946 
Protein GI194365336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.185852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGCC GCATCCCGGT CCTTGCCGCG GCATTGGCGG CTGCTCTGCT GGCAGGCTGC 
ACGCCGGCCA CCGGCAATGA TCCGGCCGTG GCCGCCACAG CAGCGAAGCC CGCGGCACAG
CGGGCGGTGG CGACCATCGC CGAGGCATTT GTCACTCCAC TGACCCCGGC CGACAACATC
GATTCGCCGG CGGCGTGGCG TGCACCGGAT GGCAAGCTGT GGCTGATTGC CACCGCCAAG
GCCACCGACA AGCTGGTGGT CTACGATGGC AGCACCGGCC AGCACCTGCG TGACGTTGGT
AGCAGCGGCA CCGGGCCAGG GCAGTTCGAT CGCCCAAACG GCATCGCGGT GACCGACGAC
CTGCTGTGGA TCGTGGAGCG CGACAATCAT CGCGTGCAGG TGCTGAGCCT GCCGGACTTC
ATCCCGCTGG CAACGTTCGC TGCCGAGGAT CTGCGCAAAC CGTACGGGTT GTGGGTCGAC
CGCCGTGCCG ATGGCTACAG CGTCTACGTC ACCGACTCCT GGGACAACGG CGAGGATGCG
CAGGGCCGTG ACATCCTGCC GCCGCTGGCC GAACTGGACA AGCGCGTGCG CCAGTACCAC
GTGACCCGCG ACGGTGCGAA GGTCGAGGCG AAGCTGGTGG CCAGCATCGG CGATACCACC
GAGGCGGGAG CGTTGCGCGT GGTCGAGTCG ATCTGGGGCG ATCCGGAGAA CGATCGCCTG
TTGATCGCCG AAGAGGACGA GAGCTACGCC AGCGAGTTCA AGGTCTACAC CCTGGCGGGC
CGTTTCACGG GTACCACCTT CGGCCGCGAT GTGTTCAAGG CGCAGGCTGA AGGCGTGACC
CTGCGCACCT GTGGCAAGGA CGGCTGGTGG ATCACCACCG AGCAGGGCAA GCAGCGCAGT
GTGTTCCACC TGTTCGACCG GCATACGTTG AAGCCTGTGG GTGCGTTCCA GGGCAATACG
GTGGCCAACA CCGACGGCAT CTGGTTGATG CAGCCGGCCA GCCCACGCTT CCCGCACGGT
GCGCTGTACG CAGTGCATGA CGACCAGGGC GTGGTCGCGT TCGACTGGGA AAGCATCGCC
AAGCAACTGG CGCTGCCATT GGAGTGTGGC GAATGA
 
Protein sequence
MGRRIPVLAA ALAAALLAGC TPATGNDPAV AATAAKPAAQ RAVATIAEAF VTPLTPADNI 
DSPAAWRAPD GKLWLIATAK ATDKLVVYDG STGQHLRDVG SSGTGPGQFD RPNGIAVTDD
LLWIVERDNH RVQVLSLPDF IPLATFAAED LRKPYGLWVD RRADGYSVYV TDSWDNGEDA
QGRDILPPLA ELDKRVRQYH VTRDGAKVEA KLVASIGDTT EAGALRVVES IWGDPENDRL
LIAEEDESYA SEFKVYTLAG RFTGTTFGRD VFKAQAEGVT LRTCGKDGWW ITTEQGKQRS
VFHLFDRHTL KPVGAFQGNT VANTDGIWLM QPASPRFPHG ALYAVHDDQG VVAFDWESIA
KQLALPLECG E