Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1558 |
Symbol | |
ID | 6475427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 1753525 |
End bp | 1754640 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642730740 |
Product | NHL repeat containing protein |
Protein accession | YP_002027946 |
Protein GI | 194365336 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.185852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGCGCC GCATCCCGGT CCTTGCCGCG GCATTGGCGG CTGCTCTGCT GGCAGGCTGC ACGCCGGCCA CCGGCAATGA TCCGGCCGTG GCCGCCACAG CAGCGAAGCC CGCGGCACAG CGGGCGGTGG CGACCATCGC CGAGGCATTT GTCACTCCAC TGACCCCGGC CGACAACATC GATTCGCCGG CGGCGTGGCG TGCACCGGAT GGCAAGCTGT GGCTGATTGC CACCGCCAAG GCCACCGACA AGCTGGTGGT CTACGATGGC AGCACCGGCC AGCACCTGCG TGACGTTGGT AGCAGCGGCA CCGGGCCAGG GCAGTTCGAT CGCCCAAACG GCATCGCGGT GACCGACGAC CTGCTGTGGA TCGTGGAGCG CGACAATCAT CGCGTGCAGG TGCTGAGCCT GCCGGACTTC ATCCCGCTGG CAACGTTCGC TGCCGAGGAT CTGCGCAAAC CGTACGGGTT GTGGGTCGAC CGCCGTGCCG ATGGCTACAG CGTCTACGTC ACCGACTCCT GGGACAACGG CGAGGATGCG CAGGGCCGTG ACATCCTGCC GCCGCTGGCC GAACTGGACA AGCGCGTGCG CCAGTACCAC GTGACCCGCG ACGGTGCGAA GGTCGAGGCG AAGCTGGTGG CCAGCATCGG CGATACCACC GAGGCGGGAG CGTTGCGCGT GGTCGAGTCG ATCTGGGGCG ATCCGGAGAA CGATCGCCTG TTGATCGCCG AAGAGGACGA GAGCTACGCC AGCGAGTTCA AGGTCTACAC CCTGGCGGGC CGTTTCACGG GTACCACCTT CGGCCGCGAT GTGTTCAAGG CGCAGGCTGA AGGCGTGACC CTGCGCACCT GTGGCAAGGA CGGCTGGTGG ATCACCACCG AGCAGGGCAA GCAGCGCAGT GTGTTCCACC TGTTCGACCG GCATACGTTG AAGCCTGTGG GTGCGTTCCA GGGCAATACG GTGGCCAACA CCGACGGCAT CTGGTTGATG CAGCCGGCCA GCCCACGCTT CCCGCACGGT GCGCTGTACG CAGTGCATGA CGACCAGGGC GTGGTCGCGT TCGACTGGGA AAGCATCGCC AAGCAACTGG CGCTGCCATT GGAGTGTGGC GAATGA
|
Protein sequence | MGRRIPVLAA ALAAALLAGC TPATGNDPAV AATAAKPAAQ RAVATIAEAF VTPLTPADNI DSPAAWRAPD GKLWLIATAK ATDKLVVYDG STGQHLRDVG SSGTGPGQFD RPNGIAVTDD LLWIVERDNH RVQVLSLPDF IPLATFAAED LRKPYGLWVD RRADGYSVYV TDSWDNGEDA QGRDILPPLA ELDKRVRQYH VTRDGAKVEA KLVASIGDTT EAGALRVVES IWGDPENDRL LIAEEDESYA SEFKVYTLAG RFTGTTFGRD VFKAQAEGVT LRTCGKDGWW ITTEQGKQRS VFHLFDRHTL KPVGAFQGNT VANTDGIWLM QPASPRFPHG ALYAVHDDQG VVAFDWESIA KQLALPLECG E
|
| |