Gene Smal_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1554 
Symbol 
ID6475423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1748741 
End bp1749628 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content65% 
IMG OID642730736 
Productbeta-lactamase domain protein 
Protein accessionYP_002027942 
Protein GI194365332 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.515759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.925755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTCT GGTCGATTCG TGGAAACTCG CAGCGCCTTG ATGGCGGTGC GATGTTTGGT 
AACGCGCCGC GCGCGTTGTG GGAAAAATGG GCGGCACCGG ACGAGCTCAA TCGCATCGAG
CTGGCCTGCC GTGCGCTGCT TGCCAGCCCG CTGGAAGGCA AGACGGTGCT GTTTGAAACC
GGTATTGGTG CCTTCTTCGA TCCACGCATG CGCGAACGCT ACGGCGTGCA GGAAAGCCAG
CACGTGCTGA TCGATTCGCT GCGCGAAGCC GGTTTCGAGC ACGAGGATAT CGACGTGGTG
GTTCTCAGCC ACCTGCACTT CGATCACGCC GGGGGCCTGC TCGCGGCCTG GAGCGAAGGG
CGTGAGCCGG AGCTGCTGTT CCCCAACGCG ACCTATGTGG TCGGTGCGCA GCACTGGCAG
CGTGCGCTGC AGCCGCACCC GCGTGACCGT GCCAGCTTCA TTCCGGAACT GCCGGGCCTG
CTGCAGGCCA GTGGCCGTCT GGAAGTGGTG GACGGCGAAT ATTCGAAGGC GCTGGGGCGC
ACCGTGCGTT TCAGTTACAG CGACGGCCAC ACGCCGGGGC TGATGCTGGC CGAAATTGTC
GGCCACGCGC GCGCCGATGA ATCACCGAAG GGCGGCGTGG TGTTCTGCGC CGATCTGATT
CCGGGCCGCT CGTGGGTGCA CGTGCCGATC ACCATGGGCT ACGACCGCAA CGCCGAGCTG
CTGATCGACG AGAAACGGCA GTTCCTCGAA GACAAGCTGG CGCGCAACGT GCATCTGTTC
TTCACCCACG ACCCGCAGGT GGCGCTGGCG CAGCTGGGCC GCGATGACAA GGGCCGTTTC
GTGACCCTGC ACGAGCAGGG CGAGCTGAAG GCACGCGCCC TGGGGTAA
 
Protein sequence
MKLWSIRGNS QRLDGGAMFG NAPRALWEKW AAPDELNRIE LACRALLASP LEGKTVLFET 
GIGAFFDPRM RERYGVQESQ HVLIDSLREA GFEHEDIDVV VLSHLHFDHA GGLLAAWSEG
REPELLFPNA TYVVGAQHWQ RALQPHPRDR ASFIPELPGL LQASGRLEVV DGEYSKALGR
TVRFSYSDGH TPGLMLAEIV GHARADESPK GGVVFCADLI PGRSWVHVPI TMGYDRNAEL
LIDEKRQFLE DKLARNVHLF FTHDPQVALA QLGRDDKGRF VTLHEQGELK ARALG