| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1546 |
|---|
| Symbol | |
|---|
| ID | 6475415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 1740171 |
|---|
| End bp | 1741496 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642730728 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_002027934 |
|---|
| Protein GI | 194365324 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0773917 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.939305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTT TTTTCCGCCG CAAGAAGCCC CAGGATGCCC CCGCAACGGA GGCTCCCAAG
ACCCAGCACT ACTCGGCTGA AGAGCTGGCG GCGGCGTTCC CGTCGGCCGC GCCCGCCGAG
GACAAGGAAC CGGCGCCGGT AGCTGCGCCA ACCGCACCCG CCCCCGTCGA GCCGCCCCCG
GCAGCGGTCG CACCGGTAAC GATCGAGCCC TCCCCGGTGG CTACAGCGCC GGTGGTCCCG
GCAGTCCCGG CTCCCACCGC TCCGAGCCCG ATTACGCAGA TCGACGTCGC CCCCGTCGCG
ACCCCGGCCA TCGAACCGGT ACCCTCACCG CTGCCTGAGC CCACCCCGGC ACCGATCACC
GACGATCTGC CTGCGGCAGC CTCCGTCGAC GCCGTGCCGG CCACGGCTGG CAAGCCCGGC
TGGCGGGAGC GCCTGCGCAA CAGCGTCATC GCGCGCAGCT TCGGCGGCCT GTTCTCGCGC
AATCCCAAGC TCGACGACGA CCTGCTGGAC GAGCTGGAAA CCGCACTGAT CACTGCCGAT
GTCGGCGTTG GTGCCACCAC CGACCTGGTG GAGGGCCTGC GCAAGCGCAT GAAGGCGCGT
GAATTCGTCG ATGCCAACGC TTTGCTTGCC GCGCTGCGTG CCGAACTGAT CGCGATCCTG
CAGCCGGTGG CCAAGCCGCT GGTGATCGAC CGCACCGCCA AGCCCTTCGT GGTGCTGACC
GTCGGCGTCA ACGGCGTCGG CAAGACCACC ACCATCGGCA AGCTGGCCAA GCGCTTCAAG
GACGAAGGCC ACAGCCTGAT GCTGGCCGCC GGTGACACCT TCCGCGCCGC TGCCGTGGCC
CAGCTGCAGG CCTGGGGCGA GCGCAACGGC GTGGCCGTGG TCGCGCAGGG TCAGAACGCT
GATGCCGCTT CAGTGGCATT CGACGCGCTA CAGGCCGGCA AGGCTCGCGG CACCTCGGTA
CTGATCGCCG ATACCGCCGG CCGCCTGCAT ACCCAGTCCG GCCTGATGAA CGAGCTGGGC
AAGATCCGCC GCGTGCTCGG CAAGATCGAC CCCACTGCAC CGCACGAAGT GCTGATGGTG
ATCGACGGCA CCACTGGCCA GAACGCGCTG TCGCAGCTGC GCCAGTTCAA CGCCGCCGTG
AACGTGACCG GCCTGGTGGT GACCAAGCTG GACGGCACCG CCAAGGGCGG CGTGGTGTTC
GCGCTAGCCC GCGAGTTCGG CATTCCGATC CGTTTCGCCG GCATCGGCGA GCGCCCGGAA
GACCTGCGCG TGTTCGATCC GGAAGCCTTC GTCGACGCCC TGCTGCCTGA GGCGCTGGGC
GCCTGA
|
|---|
| Protein sequence | MLSFFRRKKP QDAPATEAPK TQHYSAEELA AAFPSAAPAE DKEPAPVAAP TAPAPVEPPP
AAVAPVTIEP SPVATAPVVP AVPAPTAPSP ITQIDVAPVA TPAIEPVPSP LPEPTPAPIT
DDLPAAASVD AVPATAGKPG WRERLRNSVI ARSFGGLFSR NPKLDDDLLD ELETALITAD
VGVGATTDLV EGLRKRMKAR EFVDANALLA ALRAELIAIL QPVAKPLVID RTAKPFVVLT
VGVNGVGKTT TIGKLAKRFK DEGHSLMLAA GDTFRAAAVA QLQAWGERNG VAVVAQGQNA
DAASVAFDAL QAGKARGTSV LIADTAGRLH TQSGLMNELG KIRRVLGKID PTAPHEVLMV
IDGTTGQNAL SQLRQFNAAV NVTGLVVTKL DGTAKGGVVF ALAREFGIPI RFAGIGERPE
DLRVFDPEAF VDALLPEALG A
|
|---|
| |