Gene Smal_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1506 
Symbol 
ID6475374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp1703649 
End bp1704317 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID642730687 
Productprotein of unknown function DUF1275 
Protein accessionYP_002027894 
Protein GI194365284 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.128269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAATAC GCCTGCCCAC CTGGGTCTGG ATCGGCGCGG TCGCGCTTTC GTGCGTGGCT 
GGCATGGTCA ATGTGGTCGG CTTCCTCGGT TTCGAACACC AGGCCGTCAG CCACATGACC
GGCAGCACCA GCCAGCTGGG CATGGCCCTG GCCCAGGGCG ACTGGCGCGC AGTCGGCCAT
CTATGGGGAC TGTTGATCGC GTTCTCGCTG GGCGCGATGC TCAGCGGCCT GCTGATCCAG
GACAGCGCAT TGCAGCTGGG CCGTCGCTAC GGCGTGGCGC TGGCACTGGA ATCGGCGCTG
CTGCTGGTGG CCATTCCGCT GTTCGAACAG CATCAGATCT GGGGCGCACT GGCCGCCGCC
ACGGCCTGCG GCCTGCAGAA CGCGATGGCC ACCACCTTCA GTGGCGCGGT GGTGCGCACC
ACCCACCTCA GCGGCATGTT CACCGACCTC GGCATTGGCC TGGGCCACCT GCTGCGTGGA
CTGCCGCTGC AGGTTCGACG GCTGACCCTC AGCGGCCTGA TCATCAGCGG CTTCCTCGGC
GGCGGCATCC TCGGCGCCTG GTTGTTCATG CGCTGGCAAT ACGACGCCCT GCTTGCCCCC
GCCCTGCTGA CCGGCCTGAC CGGCCTGGGC TATGTGCTGT ACCAGCAGTG GGCTCGCTGG
CGACATTGA
 
Protein sequence
MGIRLPTWVW IGAVALSCVA GMVNVVGFLG FEHQAVSHMT GSTSQLGMAL AQGDWRAVGH 
LWGLLIAFSL GAMLSGLLIQ DSALQLGRRY GVALALESAL LLVAIPLFEQ HQIWGALAAA
TACGLQNAMA TTFSGAVVRT THLSGMFTDL GIGLGHLLRG LPLQVRRLTL SGLIISGFLG
GGILGAWLFM RWQYDALLAP ALLTGLTGLG YVLYQQWARW RH